FullPhysics Namespace Reference

Contains classes to abstract away details in various Spurr Radiative Transfer software. More...

Namespaces
	OldConstant
	Contains useful constants.
	units
	Define various units.

Classes
class	Absco
	This class is used to read the absco tables. More...
class	AbscoHdf
	This class is used to read the absco tables. More...
class	AbscoInterpolator
	This is a helper class that calculates the absorption cross section for a fixed set of Pressure, Temperature, and Broadner VMR (e.g. More...
class	Absorber
	This class maintains the absorber portion of the state. More...
class	AbsorberAbsco
	This class maintains the absorber portion of the state. More...
class	AbsorberAbscoOutput
	This registers the portions of the Absorber class that should be written as output. More...
class	AbsorberVmr
	This gives the Gas Absorber Volumn mixing ratio for a single gas. More...
class	AbsorberVmrFixedLevel
	This class maps the state vector to the absorber VMR on each level. More...
class	AbsorberVmrFixedLevelOutput
	This registers the portions of the AbsorberVmrFixedLevel class that should be written as output. More...
class	AbsorberVmrFixedLevelScaled
	This class maps the state vector to the absorber VMR on each level. More...
class	AbsorberVmrFixedLevelScaledOutput
	This registers the portions of the AbsorberVmrFixedLevel class that should be written as output. More...
class	AbsorberVmrImpBase
	As a design principle, we have each base class with the absolutely minimum interface needed for use from the rest of the system. More...
class	AbsorberVmrLevel
	This class maps the state vector to the absorber VMR on each level. More...
class	AbsorberVmrLevelOutput
	This registers the portions of the AbsorberVmrLevel class that should be written as output. More...
class	AbsorberVmrLevelScaled
	This class maps the state vector to the absorber VMR on each level. More...
class	AbsorberVmrLevelScaledOutput
	This registers the portions of the AbsorberVmrLevelScaled class that should be written as output. More...
class	AbsorberVmrMet
	This class maps the state vector to the absorber VMR on each level. More...
class	AbsorberVmrMetOutput
	This registers the portions of the AbsorberVmrMet class that should be written as output. More...
class	AbsorberVmrScaled
	This class maps the state vector to the absorber VMR on each level. More...
class	AccumulatedTimer
	This is a simple timer class that can be used to accumulate the time spent in multiple calls to a function. More...
class	Aerosol
	This class maintains the aerosol portion of the state. More...
class	AerosolAodOutput
	This registers the portions of the Aerosol class that should be written as output. More...
class	AerosolConsolidatedOutput
	This registers the portions of the Aerosol class that should be written as output. More...
class	AerosolExtinction
	This class maps the state vector to the aerosol extinction on each level. More...
class	AerosolExtinctionImpBase
	As a design principle, we have each base class with the absolutely minimum interface needed for use from the rest of the system. More...
class	AerosolExtinctionLinear
	This class maps the state vector to the aerosol extinction on each level. More...
class	AerosolExtinctionLog
	This class maps the state vector to the aerosol extinction on each level. More...
class	AerosolOptical
	Implementation of Aerosol. More...
class	AerosolParamOutput
	This registers the coefficients used for classes that inherits from AerosolExtinctionBaseImp. More...
class	AerosolProperty
	This gives the Aerosol properties for an Aerosol. More...
class	AerosolPropertyHdf
	This gives the Aerosol properties for an Aerosol. More...
class	AerosolPropertyImpBase
	As a design principle, we have each base class with the absolutely minimum interface needed for use from the rest of the system. More...
class	AerosolPropertyRhHdf
	This gives the Aerosol properties for an Aerosol. More...
class	AerosolShapeGaussian
	This class maps the state vector to aerosol extinction defined by a Gaussian parameterization. More...
class	Altitude
	The class handles the calculation of the altitude and gravity constants. More...
class	AltitudeHydrostatic
	This class handles the calculation of the altitude an gravity constants, automatically updating with the surface pressure or temperature profile is updated. More...
class	AltitudeOutput
	This registers the portions of the Altitude class that should be written as output. More...
class	ApplyInstrumentUnits
	An InstrumentCorrection class that applies units and scales monochromatic radiances in those cases when no other modifications applies radiances. More...
class	ArrayAd
	The AutoDerivative<T> works well, and it works with blitz if you create a blitz::Array<AutoDerivative<T>, D>, however the performance tends to be a bit poor for larger Arrays because of all the temporaries that get created. More...
class	ArrayAdCache
	Defines an interface for caching ArrayAd objects such that the underlying caching mechanism is not necessarily exposed to a user of the cache. More...
class	ArrayAdMapCache
	Caches ArrayAd objects using a std::map. More...
class	ArrayAdVectorCache
	Caches ArrayAd objects using a std::vector. More...
class	ArrayAdWithUnit
	This is a ArrayAd that also has units associated with it. More...
class	ArrayWithUnit
	We frequently have a array of numbers with units associated with them. More...
class	AtmosphereFixture
	This is a test fixture that creates an Atmosphere and related Statevector based on the unit test data set up in ConfigurationFixture. More...
class	AtmosphereOco
	This class maintains the atmosphere portion of the state, and uses this to set up the atmosphere and ground information needed to run the Radiative transfer code. More...
class	AtmRefractiveIndex
	This class provides an interface for classes that compute a refractive index for an atmosphere at a given level or layer. More...
class	AutoDerivative
	There are a number of tools that can be used to do "Automatic Differentiation" (see for example http://www.autodiff.org/?module=Tools). More...
class	AutoDerivativeRef
	Helper class that gives us a reference that we can assign a AutoDerivative to and write into the correct space in a ArrayAd. More...
class	AutoDerivativeWithUnit
	This is a AutoDerivative that also has units associated with it. More...
class	BadSampleNoiseModel
	When we have bad samples, we usually pass this to the spectral window to prevent the sample from even being used. More...
class	BardMLProblem
class	BardNLLSProblem
class	BinMap
	This is a map that takes and index and returns a value. More...
class	Brdf_Input_Exception_Handling
struct	brdf_input_exception_handling
class	Brdf_Linsup_Inputs
struct	brdf_linsup_inputs
class	Brdf_Linsup_Masters
class	Brdf_Linsup_Outputs
struct	brdf_linsup_outputs
class	Brdf_Output_Exception_Handling
struct	brdf_output_exception_handling
class	Brdf_Sup_Inputs
struct	brdf_sup_inputs
class	Brdf_Sup_Masters
class	Brdf_Sup_Outputs
struct	brdf_sup_outputs
class	BridgeLuabindAndGeneric
	Instance of BridgeLuabindAndGenericBase for a particular type. More...
class	BridgeLuabindAndGenericBase
	For use with python, it is useful to map all the LuabindObject that are a class defined in full physics (or derived from those classes) to and from a GenericObject. More...
class	BrownNLLSProblem
class	ChapmanBOA
	This class computes Bottom of the Atmosphere radiance. More...
class	ChapmanBoaRT
class	ChisqConvergence
	This class tests for convergence of a Levenberg-Marquardt solver. More...
class	CompositeInitialGuess
	A common way to create an initial guess is to have other classes responsible for portions of the state vector (e.g., an Atmosphere class creates the portion of the initial guess that handles the description of the atmosphere layers). More...
class	CompositePerturbation
	A common way to create a perturbation is to have other classes responsible for portions of the state vector (e.g., an Atmosphere class creates the portion of the initial guess that handles the description of the atmosphere layers). More...
class	ConfigurationBrdfSoilFixture
	There are a number of tests that need to use a standard set of objects, similar to what we generate when running l2_fp. More...
class	ConfigurationBrdfVegFixture
	There are a number of tests that need to use a standard set of objects, similar to what we generate when running l2_fp. More...
class	ConfigurationCoxmunkFixture
	There are a number of tests that need to use a standard set of objects, similar to what we generate when running l2_fp. More...
class	ConfigurationCoxmunkPlusLambertianFixture
	There are a number of tests that need to use a standard set of objects, similar to what we generate when running l2_fp. More...
class	ConfigurationFixture
	There are a number of tests that need to use a standard set of objects, similar to what we generate when running l2_fp. More...
class	ConnorConvergence
	This class tests for convergence of a Levenberg-Marquardt solver. More...
class	ConnorConvergenceOutput
	This registers the portions of the ConnorConvergence class that should be written as output. More...
class	ConnorCostFunction
class	ConnorIterationLog
	This is an observer of the ConnorSolver that writes out the state vector values in a nicely formated way on each iteration. More...
class	ConnorSolver
class	ConnorSolverMAP
	This solves a nonlinear least squares problem using Levenberg-Marquardt. More...
class	ConnorSolverOutput
	This registers the portions of the ConnorSolver class that should be written as output. More...
class	ConnorSolverState
	Class that saves the state of a ConnorSolver. More...
class	Constant
	This class contains various constants. More...
class	ConvergenceCheck
	This class tests for convergence of a Levenberg-Marquardt solver. More...
class	CostFunc
	The base class for all problem classes that implement a cost function. More...
class	CostFuncDiff
	The base class for all problem classes that implement a cost function and its gradient. More...
class	CostFuncDiffState
	The state for a problem with implemented cost function and its gradient. More...
class	CostFuncState
	The state for a problem that only its cost function is implemented. More...
class	CostFunction
	This class calculates a cost function, along with a jacobian. More...
class	CostMinimizer
	The base class for all iterative cost minimizers that do not require derivatives of any order. More...
class	CostMinimizerGSL
class	DefaultConstant
	This class is an implementation of Constant that uses hard coded values suitable for Earth. More...
class	DirChange
	Utility class. More...
class	Dispersion
	This class calculates the wavenumber for each pixel in a single band of an Instrument. More...
class	DispersionFit
	Given a single frame of data, estimate the spectral shift in band 1P. More...
class	DispersionFitOutput
	This registers the portions of the DispersionFit class that should be written as output. More...
class	DispersionPolynomial
	This is an implementation of Dispersion that uses a polynomial expression to calculate the wavenumbers. More...
class	DispersionPolynomialOutput
	This registers the portions of the DispersionPolynomial class that should be written as output. More...
class	DoubleWithUnit
	We frequently have a double with units associated with it. More...
class	EmpiricalOrthogonalFunction
	This class applies a empirical orthogonal function (EOF) correction to instrument data. More...
class	EmpiricalOrthogonalFunctionOutput
	This registers the portions of the EmpiricalOrthogonalFunction class that should be written as output. More...
class	ErrorAnalysis
	This calculates a variety of values to help with the error analysis of a Level 2 Full Physics Run. More...
class	ErrorAnalysisOutput
	This registers the portions of the ErrorAnalysis class that should be written as output. More...
class	ExampleLevel1b
	This is an example L1B reader that reads a HDF formatted file that corresponds one-to-one with the expected interface. More...
class	ExampleMetFile
	This class implements and example Meteorological reader that reads data from an HDF file with datasets of the same name as the values. More...
class	Exception
	This is the base of the exception hierarchy for Full Physics code. More...
class	FdForwardModel
	This a forward model class that calcualtes jacobians using the finite difference method. More...
class	FeDisableException
	To detect things like divide by zero, we may turn on floating point exceptions. More...
class	FilteringIstream
	This allows filtering stream to created on top of an underlying ifstream. More...
class	FilteringOstream
	This allows filtering stream to created on top of an underlying ofstream. More...
class	FitStatistic
	This class holds various parameters describing how good of a fit we have. More...
class	FluorescenceEffect
	Implements adding the effect of fluorescence to A-Band spectrum by using a retrievable across the band parametrization of the effect. More...
class	FluorescenceEffectOutput
	This registers the portions of the FluorescenceEffect class that should be written as output. More...
class	FmNLLSProblem
	This is the forward model cost function, rewritten to match the standard format used in nonlinear least squares solvers. More...
class	ForwardModel
	The forward model represents the encapsulation of modeling spectra from an atmospheric state then applying instrument specific effects to it. More...
class	ForwardModelSpectralGrid
	This is the Forward Model spectral grid. More...
class	FpLogger
	This is the implementation of the Logger used for the Full Physics program. More...
class	FreudensteinRothNLLSProblem
class	FunctionTimer
	Helper class for AccumulatedTimer. More...
class	FunctionTimerR
	Helper class for AccumulatedTimer. More...
class	GasAbsorption
	This class determine the gaseous absorption coefficient for a given wave number, temperature and pressure. More...
class	GasVmrApriori
	Adapts the ReferenceVmrApriori class into a form that is easier to work with in the context of how this framework works. More...
class	GasVmrAprioriOutput
	This registers the portions of the GasVmrApriori class that should be written as output. More...
class	GenericObject
	For use with SWIG, it is useful to have a base class that everything can be cast to. More...
class	GlobalFixture
	This is a global fixture that is available to all unit tests. More...
class	Ground
	This class maintains the ground portion of the state. More...
class	GroundBrdf
	This class implements the Breon + Rahman ground type. More...
class	GroundBrdfOutput
	This registers the portions of the GroundBrdf class that should be written as output. More...
class	GroundBrdfSoil
class	GroundBrdfVeg
class	GroundCoxmunk
	This class implements a Coxmunk ground type. More...
class	GroundCoxmunkOutput
	This registers the portions of the GroundCoxmunk class that should be written as output. More...
class	GroundCoxmunkPlusLambertian
	This class implements a Coxmunk plus Lambertian ground type. More...
class	GroundCoxmunkPlusLambertianOutput
	This registers the portions of the GroundCoxmunkPlusLambertian class that should be written as output. More...
class	GroundLambertian
	This class implements a Lambertian albedo as a ground type. More...
class	GroundLambertianOutput
	This registers the portions of the GroundLambertian class that should be written as output. More...
class	GslIntegrate
	This is a thin wrapper around the GSL integration function. More...
class	GslMatrix
	This provides thin wrapper around the GNU Scientific Library gsl_matrix. More...
class	GslVector
	This provides thin wrapper around the GNU Scientific Library gsl_vector. More...
class	HdfConstant
class	HdfFile
	This class reads and writes a HDF5 file. More...
class	HdfFileGenerating
	To avoid creating files when an error occurs, we create the file with the name ".generating" appended. More...
class	HelicalValleyNLLSProblem
class	HighResSpectrumOutput
	This class will recieve observer notifications from any class that pushes out NamedSpectrum and write them to the output file in individual datasets for the spectral domain and spectral range parts. More...
class	HresWrapper
	For timing purposes, it can be useful to separate out the high resolution radiative transfer vs. More...
class	IfstreamCs
	It can be convenient to allow comments in a text data file that are ignored by the program reading it. More...
class	Ils
	This class models an Instrument Line Shape (ILS). More...
class	IlsConvolution
	This is a ILS where we use a Dispersion object to determine the wavenumbers of each pixel, and convolve against a IlsFunction. More...
class	IlsFunction
	This class models an Instrument Line Shape (ILS) function. More...
class	IlsGaussian
	This is an ILS function that is a Gaussian. More...
class	IlsInstrument
	This is a instrument that uses a Ils object for each spectrometer to model the instrument. More...
class	IlsTable
	This class in a IlsFunction where we get the ILS response by using a table of measured values. More...
class	InitialGuess
	This gets the initial guess and the apriori state vector values. More...
class	InitialGuessBuilder
	Class that builds a portion of the state vector. More...
class	InitialGuessValue
	This is a simple implementation of InitialGuessBuilder that just has variables used to give the apriori, initial guess, and covariance. More...
class	Instrument
	This applies a instrument model to radiances. More...
class	InstrumentCorrection
	This class models an Instrument correction. More...
class	InstrumentDoppler
	Corrects Spectrum spectral domain to account for the doppler shift due to the relative velocity between earth and the instrument. More...
class	InterpolatePoint
	Interface for interpolating values. More...
class	InterpolatePoint< AutoDerivative< double >, AutoDerivative< double > >
class	IstreamCompress
	/ This opens a file for reading, possibly with automatic / decompression. More...
class	IterativeSolver
	The base class for all iterative optimizers. More...
class	IterativeSolverDer
	The base class for all iterative optimizers that use first order derivatives. More...
class	JennrichSampsonNLLSProblem
class	L2FpConfiguration
	Before running L2 full physics, we need to create the solver that we will be using, along with registering whatever output we will be generating. More...
class	L2FpConfigurationLua
	This is an implementation of L2FpConfiguration that uses Lua. More...
class	Level1b
	This is used to read a Level 1B file. More...
class	Level1bAverage
	This reads averages a set of Level1b classes to get the various values. More...
class	Level1bCache
	This is a Level1b implementation that just saves the data read from another Level1b object. More...
class	Level1bSampleCoefficient
	This is used to wrap the nominal Level 1B file reader. More...
class	Level1bScaleRadiance
	Scales the measured radiance of another Level1b class for each spectral band. More...
class	Lidort_Exception_Handling
struct	lidort_exception_handling
class	Lidort_Fixed_Boolean
struct	lidort_fixed_boolean
class	Lidort_Fixed_Chapman
struct	lidort_fixed_chapman
class	Lidort_Fixed_Control
struct	lidort_fixed_control
class	Lidort_Fixed_Inputs
struct	lidort_fixed_inputs
class	Lidort_Fixed_Lincontrol
struct	lidort_fixed_lincontrol
class	Lidort_Fixed_Lininputs
struct	lidort_fixed_lininputs
class	Lidort_Fixed_Linoptical
struct	lidort_fixed_linoptical
class	Lidort_Fixed_Optical
struct	lidort_fixed_optical
class	Lidort_Fixed_Sunrays
struct	lidort_fixed_sunrays
class	Lidort_Fixed_Uservalues
struct	lidort_fixed_uservalues
class	Lidort_Input_Exception_Handling
struct	lidort_input_exception_handling
class	Lidort_Inputs
class	Lidort_Lcs_Masters
class	Lidort_Linatmos
struct	lidort_linatmos
class	Lidort_Linoutputs
struct	lidort_linoutputs
class	Lidort_Linsup_Brdf
struct	lidort_linsup_brdf
class	Lidort_Linsup_Inout
struct	lidort_linsup_inout
class	Lidort_Linsup_Sleave
struct	lidort_linsup_sleave
class	Lidort_Linsup_Ss
struct	lidort_linsup_ss
class	Lidort_Linsup_Ss_Atmos
struct	lidort_linsup_ss_atmos
class	Lidort_Linsup_Ss_Surf
struct	lidort_linsup_ss_surf
class	Lidort_Linsurf
struct	lidort_linsurf
class	Lidort_Lps_Masters
class	Lidort_Main_Outputs
struct	lidort_main_outputs
class	Lidort_Masters
class	Lidort_Modified_Boolean
struct	lidort_modified_boolean
class	Lidort_Modified_Chapman
struct	lidort_modified_chapman
class	Lidort_Modified_Control
struct	lidort_modified_control
class	Lidort_Modified_Inputs
struct	lidort_modified_inputs
class	Lidort_Modified_Lininputs
struct	lidort_modified_lininputs
class	Lidort_Modified_Optical
struct	lidort_modified_optical
class	Lidort_Modified_Sunrays
struct	lidort_modified_sunrays
class	Lidort_Modified_Uservalues
struct	lidort_modified_uservalues
class	Lidort_Outputs
struct	lidort_outputs
struct	Lidort_Pars
class	Lidort_Structure
class	Lidort_Sup_Accessories
class	Lidort_Sup_Brdf
struct	lidort_sup_brdf
struct	lidort_sup_inout
class	Lidort_Sup_Inout
class	Lidort_Sup_Sleave
struct	lidort_sup_sleave
struct	lidort_sup_ss
class	Lidort_Sup_Ss
class	LidortBrdfDriver
	LIDORT specific BRDF driver implementation. More...
class	LidortCoxmunkFixture
	This is a test fixture that creates a Atmosphere, Statevector, and LidortRt based on the ConfigurationCoxmunkFixture. More...
class	LidortCoxmunkPlusLambertianFixture
	This is a test fixture that creates a Atmosphere, Statevector, and LidortRt based on the ConfigurationCoxmunkPlusLambertianFixture. More...
class	LidortDriverBrdfVegFixture
	Fixture for LidortRtDriver coxmunk mode. More...
class	LidortDriverCommonFixture
	Base fixture for testing LidortRtDriver. More...
class	LidortDriverCoxmunkFixture
	Fixture for LidortRtDriver coxmunk mode. More...
class	LidortDriverLambertianFixture
	Fixture for LidortRtDriver lambertian mode. More...
class	LidortDriverLambertianThermalFixture
	Fixture for LidortRtDriver lambertian mode thermal mode. More...
class	LidortLambertianFixture
	This is a test fixture that creates a Atmosphere, Statevector, and LidortRt based on the ConfigurationFixture. More...
class	LidortLowHighCommon
class	LidortLowHighCoxmunkFixture
	This is a test fixture that creates a Atmosphere, Statevector, and LidortLowHighDriver based on the ConfigurationCoxmunkFixture. More...
class	LidortLowHighCoxmunkPlusLambertianFixture
	This is a test fixture that creates a Atmosphere, Statevector, and LidortRt based on the ConfigurationCoxmunkPlusLambertianFixture. More...
class	LidortLowHighFixtureNoPolarization
	This is a test fixture that creates a Atmosphere, Statevector, and LidortLowHighDriver based on the ConfigurationFixture. More...
class	LidortLowHighLambertianFixture
	This is a test fixture that creates a Atmosphere, Statevector, and LidortLowHighDriver based on the ConfigurationFixture. More...
class	LidortRt
	Uses the Spurr interfaces to construct a radiative transfer class connecting L2 FP and LIDORT 3.5. More...
class	LidortRtCommonFixture
	Base fixture for testing LidortRt modes. More...
class	LidortRtDriver
	LIDORT specific Radiative transfer interface implementation. More...
class	LinearInterpolate
	This class takes a set of points and values, and linearly interpolates between those values. More...
class	LinearInterpolate2Point
	This does linear interpolate between two points. More...
class	LinearInterpolate2Point< AutoDerivative< double >, AutoDerivative< double > >
	This is a specialization of LinearInterpolate2Point for AutoDerivative. More...
class	LinearInterpolate< AutoDerivative< double >, AutoDerivative< double > >
	This is a specialization of LinearInterpolate for AutoDerivative. More...
class	LinearLogInterpolate
	Wrapper around LinearInterpolate that uses log(y) rather than x and y when interpolating. More...
class	LinearLogInterpolate< AutoDerivative< double >, AutoDerivative< double > >
	Specialization for AutoDerivative<double> types. More...
class	Logger
	This is a simple logger. More...
class	LogHelper
	This is a class that holds the level we are logging. More...
class	LogImp
	The actual implementation of the Logger. More...
class	LogLinearInterpolate
	Wrapper around LinearInterpolate that uses log(x) rather than x in interpolating. More...
class	LogLogInterpolate
	Wrapper around LinearInterpolate that uses log(x) and log(y) rather than x and y when interpolating. More...
class	LogLogInterpolate< AutoDerivative< double >, AutoDerivative< double > >
	Specialization for AutoDerivative<double> types. More...
class	LogTiming
	This is a helper class that logs basic timing information to the Logger. More...
class	LRadDriver
	This class drives the LRAD code, which gives a polarization correction to scalar intensity and jacobians. More...
class	LRadRt
	This class drives the LRAD code, which gives a polarization correction to scalar intensity and jacobians. More...
class	LsiRt
	This does a Low Stream Interpolator correction to another RadiativeTransfer object. More...
class	LuabindIterator
	This is a light wrapper around the luabind::iterator. More...
class	LuabindObject
	This is a light wrapper around the luabind::object. More...
class	LuaCallback
	This is a simple object to call a callback that can be used in Lua. More...
class	LuaState
	This is a light wrapper around the lua_state object. More...
class	LuaStateImp
class	MaxAPosteriori
	The base class for maximum a posteriori estimation. More...
class	MaxAPosterioriOutput
	This registers the portions of the MaxAPosteriori class that should be written as output. More...
class	MaxAPosterioriStandard
class	MaxLikelihood
	The base class for maximum likelihood estimation. More...
class	MerraAerosol
	This class is used to create the Aerosol from a Merra climatology file. More...
class	Meteorology
	Defines the interface for supplying meteorological data. More...
class	MetPassThroughOutput
	Writes source filenames into the output file. More...
class	MeyerMLProblem
class	MeyerNLLSProblem
class	ModelMeasure
	The base class for models and measurements. More...
class	ModelMeasureBard
class	ModelMeasureMeyer
class	ModelMeasureStandard
class	ModelState
	The state for a parametrized mathematical model (a vector function) and its Jacobian. More...
class	NamedSpectrum
	Adds name and spec index fields to a Spectrum. More...
class	NLLSMaxAPosteriori
class	NLLSMaxLikelihood
class	NLLSProblem
	The base class for the Non-Linear Least Squares problem. More...
class	NLLSProblemScaled
class	NLLSProblemState
	The state for a NLLS problem with implemented residual function and its Jacobian. More...
class	NLLSSolver
	The base class for the solvers of the Nonlinear-Least-Squares Problem. More...
class	NLLSSolverGSL
class	NLLSSolverGSLLMDER
class	NLLSSolverGSLLMSDER
class	NLLSSolverGSLSM
class	NLLSSolverLM
class	NoiseModel
	Interface for calculating noise/uncertainty values from radiance data given some internal representation of the noise model. More...
class	NonuniformSpectrumSampling
	This is a simple SpectrumSampling that is just a nonuniform sampling. More...
class	null_deleter
	Class for use with boost::shared_ptr when we don't want data to be deleted. More...
class	null_type
	Dummy class to use as a nice default for type_index. More...
class	Observable
	Mixin for a class that allows other classes to observe it state. More...
class	Observation
class	ObservationId
	Defines a simple mechanism by where a specific dataset from a HDF file is read along with some sort of identifer to obtain an index that should be used for extracting data. More...
class	ObservationLevel1b
class	Observer
	Simple Mixin to be and Observer of another object of class T. More...
class	OcoRefractiveIndex
	Computes refractive index per level/layer using a method that takes into account knowledge of OCO spectral domains. More...
class	OstreamCompress
	/ This opens a file for writing, possibly with automatic / compression. More...
class	OstreamPad
	This is a filtering stream that adds a pad to the front of every line written out. More...
class	OstreamPadFilter
class	Output
	This is the base class for classes that write output for Level 2 Full Physics. More...
class	OutputBlitz1d
class	OutputBlitz2d
class	OutputDouble
class	OutputHdf
	This write the output of the Level 2 Full physics. More...
class	OutputHdfIteration
	This write the output of the Level 2 Full physics. More...
class	OutputTemplate
	Most of the time the write_data needed by Output is best done through a template. More...
class	PCABinning
class	Perturbation
	This gets the perturbation to use with a finite difference Jacobian. More...
class	PerturbationBuilder
	Class that builds a perturbation to use for a finite difference Jacobian. More...
class	Poly1d
	A one-dimensional polynomial class. More...
class	PowellNLLSProblem
class	PowellSingularNLLSProblem
class	Pressure
	This class maintains the pressure portion of the state. More...
class	PressureFixedLevel
	This class maintains the pressure portion of the state. More...
class	PressureFixedLevelOutput
	This registers the portions of the PressureFixedLevel class that should be written as output. More...
class	PressureImpBase
	As a design principle, we have each base class with the absolutely minimum interface needed for use from the rest of the system. More...
class	PressureLevelInput
	In a retrieval, there are typically two different pressure levels of interest. More...
class	PressureOutput
	This registers the portions of the Pressure class that should be written as output. More...
class	PressureSigma
	This class maintains the pressure portion of the state. More...
class	Printable
	This is a Mixin for classes that can be printed. More...
class	ProblemState
	The base class for all problem states. More...
class	RadianceScaling
	This abstract class provides the generic capabilities for applying a radiance scaling to a Radiance. More...
class	RadianceScalingLinearFit
	Implements a fitted radiance scaling correction where the correction is determined by a linear fit of the measured spectra to the radiance input instead of using the state vector for fitting. More...
class	RadianceScalingOutput
	This registers the portions of the RadianceScaling class that should be written as output. More...
class	RadianceScalingSvFit
	Implements a fitted radiance scaling correction. More...
class	RadiantDriver
	This class drives the RADIANT Radiative Transfer code. More...
class	RadiativeTransfer
	This runs a Radiative Transfer code to determine the reflectance for a given set of wavelengths. More...
class	RadiativeTransferFixedStokesCoefficient
	For GOSAT and OCO, we have a set of stokes coefficients to go from Stokes vector to radiation. More...
class	RadiativeTransferImpBase
	As a design principle, we have each base class with the absolutely minimum interface needed for use from the rest of the system. More...
class	RadiativeTransferRetrievable
	Interface class for radiative transfer implementations that happen to have retrievable parameters. More...
class	RadiativeTransferSingleWn
	This is a RadiativeTransfer that supplies an interface that can be called for a single wavenumber. More...
class	Rayleigh
	This class calculates the Rayleigh portion of the optical depth. More...
class	RayleighGreekMoment
	This class provides the Rayleigh Greek Moments. More...
class	ReferenceVmrApriori
	Creates a VMR profile for a gas using a set of dated reference VMRs with a known latitude. More...
class	RegisterLua
	This class handles the registration of luabind class wrappers with Lua. More...
class	RegisterOutputBase
	As described in the Output class, we have a decentralized model of producing output for L2 Full Physics. More...
class	RelativeHumidity
	This calculates the relative humidity. More...
class	Return1Point
	This just returns the same y value, always. More...
class	Return1Point< AutoDerivative< double >, AutoDerivative< double > >
class	Rosenbrock2NLLSProblem
class	RtAtmosphere
	This class is responsible for setting up the atmosphere and ground information needed to run the Radiative transfer code. More...
class	SampleGrid
	This determines the sample grid that should be used for each of the instrument indexes. More...
class	ScatteringMomentInterpolate
class	ScatteringMomentInterpolate2Point
	The calculation of the phase function scattering matrix moments is fairly expensive. More...
class	SimpleFixedSpectrumSampling
	This is a simple SpectrumSampling that is just a uniform sampling. More...
class	SimpleRefractiveIndex
	Computes refractive index per level/layer using a simple approximation using pressure and temperature. More...
struct	sleave_sup_inputs
class	Sleave_Sup_Inputs
class	SolarAbsorptionAndContinuum
	This applies a solar model to radiances to model the incoming solar irradiance. More...
class	SolarAbsorptionGfitFile
	This class calculates the solar absorption spectrum. More...
class	SolarAbsorptionSpectrum
	This class calculates the solar absorption spectrum. More...
class	SolarAbsorptionTable
	This class calculates the solar absorption spectrum. More...
class	SolarContinuumPolynomial
	This class calculates the solar continuum spectrum. More...
class	SolarContinuumSpectrum
	This class calculates the solar continuum spectrum. More...
class	SolarContinuumTable
	This class calculates the solar continuum spectrum. More...
class	SolarDopplerShift
	This class handles the solar Doppler stretch to calculate the shift of the solar lines with respect to the telluric lines. More...
class	SolarDopplerShiftL1b
	This class handles the solar Doppler stretch to calculate the shift of the solar lines with respect to the telluric lines. More...
class	SolarDopplerShiftPolynomial
	This class handles the solar Doppler stretch to calculate the shift of the solar lines with respect to the telluric lines. More...
class	SolarModel
	This applies a solar model to reflectance to model the incoming solar irradiance. More...
class	SolverFinishedFixture
	This is a test fixture that puts us into the state we are in after doing the solver step of l2_fp. More...
class	SolverIterationLog
	This is an observer of IterativeSolver that writes out the state vector values in a nicely formated way on each accepted iteration. More...
class	SourceFilesOutput
	Writes source filenames into the output file. More...
class	SpectralBound
	This gives the upper and lower bounds of the SpectralWindow. More...
class	SpectralDomain
	For different instruments, it is more natural to either work with wavenumbers (e.g., GOSAT) or wavelength (e.g., OCO). More...
class	SpectrallyResolvedNoise
	Adds a spectrally varying modification to an existing noise model. More...
class	SpectralParametersOutput
	This registers the portions of the ForwardModel class that should be written as output. More...
class	SpectralRange
	We have a number of different spectrums that appear in different parts of the code. More...
class	SpectralWindow
	This class represents a the spectral window. More...
class	SpectralWindowRange
	This is an implementation of a SpectralWindow that covers a fixed window. More...
class	Spectrum
	This is a full spectrum, which contains a SpectralRange and SpectralDomain. More...
class	SpectrumEffect
	This class models models any effects that need to be applied to high resolution spectra after the radiative transfer model has finished its work. More...
class	SpectrumEffectImpBase
	As a design principle, we have each base class with the absolutely minimum interface needed for use from the rest of the system. More...
class	SpectrumSampling
	This determines the sampling of the spectrum that should be used for each of the spectrum indexes. More...
class	SpectrumSamplingFixedSpacing
	This generates a spectrum sampling that covers all the high resolution points needed to create the spectral domain covered by the given Instrument, subject to the given low resolution grid. More...
class	SpurrBrdfDriver
	Abstracts away set up of BRDF kernel interfaces. More...
class	SpurrRt
	Abstract Interface for Rt classes based on Spurr driver implementations. More...
class	SpurrRtDriver
	Abstracts away set up of Radiative Transfer software from Rob Spurr into a simpler common inteface used by the L2 software. More...
class	StackedRadianceMixin
class	StandardForwardModel
	This is the forward model used form GOSAT/OCO. More...
class	StandardForwardModelOutput
	This registers the portions of the StandardForwardModel class that should be written as output. More...
class	StateVector
	This handles informing a set of interested objects when the state vector has updated. More...
class	StateVectorObserver
	This is an observer of a StateVector. More...
class	StateVectorOutput
	This registers the portions of the StateVector class that should be written as output. More...
class	StokesCoefficient
	This class maintains the stokes coefficient portion of the state. More...
class	StokesCoefficientConstant
	This class maintains the stokes coefficient portion of the state. More...
class	StokesCoefficientFraction
	This class maintains the stokes coefficient portion of the state. More...
class	StokesCoefficientFractionOutput
	This registers the portions of the StokesCoefficientFraction class that should be written as output. More...
class	StokesCoefficientImpBase
	As a design principle, we have each base class with the absolutely minimum interface needed for use from the rest of the system. More...
class	SubStateVectorArray
	It is common to have a class that is an Observable with a set of coefficients, a subset of which are updated by changes to the StateVector. More...
class	SubStateVectorObserver
	A common StateVectorObserver just "owns" a subset of the StateVector. More...
class	SubStateVectorProxy
	Proxies for multiple SubStateVectorObserver classes that are combined for a result, but handle their state vector data seperately. More...
class	SurfaceTemperature
	This class represents the surface of the temperature under observation. More...
class	SurfaceTemperatureDirect
	Implements a direct representation of the surface temperature in the atmospheric state from the supplied value. More...
class	SwigTypeMapper
	This is the implementation of SwigTypeMapperBase. More...
class	SwigTypeMapperBase
	This is the base class that is used by fp_shared_ptr.i to map a shared_ptr to a python object. More...
class	Temperature
	This class maintains the temperature portion of the state. More...
class	TemperatureFixedLevel
	This class maintains the temperature portion of the state. More...
class	TemperatureFixedLevelOutput
	This registers the portions of the TemperatureFixedLevel class that should be written as output. More...
class	TemperatureImpBase
	As a design principle, we have each base class with the absolutely minimum interface needed for use from the rest of the system. More...
class	TemperatureLevelOffset
	This class maintains the temperature portion of the state. More...
class	TemperatureLevelOffsetOutput
	This registers the portions of the TemperatureLevelOffset class that should be written as output. More...
class	TemperatureMet
	This class maintains the temperature portion of the state. More...
class	TemperatureMetOutput
	This registers the portions of the TemperatureMet class that should be written as output. More...
class	TemperatureOffset
	This class maintains the temperature portion of the state. More...
class	Time
	This is a simple time class. More...
class	Twostream_Lps_Master
class	Twostream_Ls_Brdf_Supplement
class	TwostreamBrdfDriver
	TwoStream specific BRDF driver implementation. More...
class	TwostreamRt
	Uses the Spurr interfaces to construct a radiative transfer class connecting L2 FP and TwoStream. More...
class	TwostreamRtDriver
	TwoStream specific Radiative transfer driver implementation. More...
class	type_index
	This is a wrapper around std::type_info that allows it to be used as an index in a associative container. More...
class	UniformSpectrumSampling
	This spectrum sampling creates a grid that begins the nearest ils_half_width before the low resolution grid beginning point and uniformly increases along some spacing until one ils_half_width past the end of the lowe resolution grid. More...
class	Unit
	Libraries such as boost::units allow unit handling where we know the units at compile time. More...

Typedefs
typedef IlsTable< LinearInterpolate< AutoDerivative< double >, AutoDerivative< double > > >	IlsTableLinear
typedef IlsTable< LinearLogInterpolate< AutoDerivative< double >, AutoDerivative< double > > >	IlsTableLog

Enumerations
enum	SpurrBrdfType {   LAMBERTIAN = 1, ROSSTHIN = 2, ROSSTHICK = 3, LISPARSE = 4,   LIDENSE = 5, HAPKE = 6, ROUJEAN = 7, RAHMAN = 8,   COXMUNK = 9, BPDFSOIL = 10, BPDFVEGN = 11, BRDFNDVI = 12,   NEWCMGLINT = 13 }
	These match numbers used internal to the Fortran code for Spurr based RTs. More...

Functions
blitz::Array< AutoDerivative< double >, 1 >	auto_derivative (const blitz::Array< double, 1 > &Val, const blitz::Array< double, 2 > &Jac)
	Utility routine to take value and Jacobian separately and create a blitz::Array<AutoDerivative<double>, 1> More...
blitz::Array< AutoDerivative< double >, 1 >	auto_derivative (const blitz::Array< double, 1 > &Val, int i_th, int nvars)
blitz::Array< AutoDerivative< double >, 2 >	auto_derivative (const blitz::Array< double, 2 > &Val, const blitz::Array< double, 3 > &Jac)
blitz::Array< AutoDerivative< double >, 3 >	auto_derivative (const blitz::Array< double, 3 > &Val, const blitz::Array< double, 4 > &Jac)
void	brdf_input_exception_handling_bs_inputactions_get (void **fortran_type_c, const int *bs_inputactions_in_shape_1, const int *bs_inputactions_in_len, const char *bs_inputactions_in)
void	brdf_input_exception_handling_bs_inputmessages_get (void **fortran_type_c, const int *bs_inputmessages_in_shape_1, const int *bs_inputmessages_in_len, const char *bs_inputmessages_in)
void	brdf_input_exception_handling_c_alloc_init (struct brdf_input_exception_handling *transfer_struct_c, void **fortran_type_c)
void	brdf_input_exception_handling_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	brdf_input_exception_handling_c_destroy (void **fortran_type_c)
void	brdf_input_exception_handling_c_init_only (struct brdf_input_exception_handling *transfer_struct_c, void **fortran_type_c)
void	brdf_linsup_inputs_c_alloc_init (struct brdf_linsup_inputs *transfer_struct_c, void **fortran_type_c)
void	brdf_linsup_inputs_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	brdf_linsup_inputs_c_destroy (void **fortran_type_c)
void	brdf_linsup_inputs_c_init_only (struct brdf_linsup_inputs *transfer_struct_c, void **fortran_type_c)
void	brdf_linsup_masters_m_brdf_lin_inputmaster_wrap (const int *filnam_in_len, const char *filnam_in, void **brdf_sup_in_in, void **brdf_linsup_in_in, void **brdf_sup_inputstatus_in)
void	brdf_linsup_masters_m_brdf_lin_mainmaster_wrap (const bool *do_debug_restoration_in, const int *nmoments_input_in, void **brdf_sup_in_in, void **brdf_linsup_in_in, void **brdf_sup_out_in, void **brdf_linsup_out_in, void **brdf_sup_outputstatus_in)
void	brdf_linsup_masters_m_read_wrap (const char *filename, const int *filename_len, void **brdf_sup_in_in, void **brdf_linsup_in_in, void **brdf_sup_inputstatus_in, void **brdf_sup_out_in, void **brdf_linsup_out_in, void **brdf_sup_outputstatus_in)
void	brdf_linsup_masters_m_write_wrap (const char *filename, const int *filename_len, void **brdf_sup_in_in, void **brdf_linsup_in_in, void **brdf_sup_inputstatus_in, void **brdf_sup_out_in, void **brdf_linsup_out_in, void **brdf_sup_outputstatus_in)
void	brdf_linsup_outputs_c_alloc_init (struct brdf_linsup_outputs *transfer_struct_c, void **fortran_type_c)
void	brdf_linsup_outputs_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	brdf_linsup_outputs_c_destroy (void **fortran_type_c)
void	brdf_linsup_outputs_c_init_only (struct brdf_linsup_outputs *transfer_struct_c, void **fortran_type_c)
void	brdf_output_exception_handling_bs_outputmessages_get (void **fortran_type_c, const int *bs_outputmessages_in_shape_1, const int *bs_outputmessages_in_len, const char *bs_outputmessages_in)
void	brdf_output_exception_handling_c_alloc_init (struct brdf_output_exception_handling *transfer_struct_c, void **fortran_type_c)
void	brdf_output_exception_handling_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	brdf_output_exception_handling_c_destroy (void **fortran_type_c)
void	brdf_output_exception_handling_c_init_only (struct brdf_output_exception_handling *transfer_struct_c, void **fortran_type_c)
void	brdf_sup_inputs_bs_brdf_names_get (void **fortran_type_c, const int *bs_brdf_names_in_shape_1, const int *bs_brdf_names_in_len, const char *bs_brdf_names_in)
void	brdf_sup_inputs_c_alloc_init (struct brdf_sup_inputs *transfer_struct_c, void **fortran_type_c)
void	brdf_sup_inputs_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	brdf_sup_inputs_c_destroy (void **fortran_type_c)
void	brdf_sup_inputs_c_init_only (struct brdf_sup_inputs *transfer_struct_c, void **fortran_type_c)
void	brdf_sup_masters_m_brdf_inputmaster_wrap (const int *filnam_in_len, const char *filnam_in, void **brdf_sup_in_in, void **brdf_sup_inputstatus_in)
void	brdf_sup_masters_m_brdf_mainmaster_wrap (const bool *do_debug_restoration_in, const int *nmoments_input_in, void **brdf_sup_in_in, void **brdf_sup_out_in, void **brdf_sup_outputstatus_in)
void	brdf_sup_masters_m_read_wrap (const char *filename, const int *filename_len, void **brdf_sup_in_in, void **brdf_sup_inputstatus_in, void **brdf_sup_out_in, void **brdf_sup_outputstatus_in)
void	brdf_sup_masters_m_write_wrap (const char *filename, const int *filename_len, void **brdf_sup_in_in, void **brdf_sup_inputstatus_in, void **brdf_sup_out_in, void **brdf_sup_outputstatus_in)
void	brdf_sup_outputs_c_alloc_init (struct brdf_sup_outputs *transfer_struct_c, void **fortran_type_c)
void	brdf_sup_outputs_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	brdf_sup_outputs_c_destroy (void **fortran_type_c)
void	brdf_sup_outputs_c_init_only (struct brdf_sup_outputs *transfer_struct_c, void **fortran_type_c)
AutoDerivative< double >	calc_Dair (const AutoDerivative< double > &p, const AutoDerivative< double > &tc)
double	calc_nw (double wlm2)
AutoDerivative< double >	calc_rho (const AutoDerivative< double > &p, const AutoDerivative< double > &x, const AutoDerivative< double > &M, const AutoDerivative< double > &Z, const AutoDerivative< double > &T)
AutoDerivative< double >	calc_Z (const AutoDerivative< double > &p, const AutoDerivative< double > &T, const AutoDerivative< double > &tc, const AutoDerivative< double > &xw)
blitz::Array< double, 2 >	cholesky_decomposition (const blitz::Array< double, 2 > &A)
	This calculates the Cholesky Decompostion of A so that A = L L^T. More...
template<class T1 , class T2 >
int	closest_point (const blitz::Array< T1, 1 > &target, T2 data)
template<class T1 , class T2 >
blitz::Array< int, 1 >	closest_point (const blitz::Array< T1, 1 > &target, const blitz::Array< T2, 1 > &data)
double	conversion (const Unit &Dunit_from, const Unit &Dunit_to)
	Return conversion factor to go from one unit to another. More...
std::string	environment_substitute (const std::string &In)
	This routine takes a string that may have one or more strings in it like . More...
void	exception_handling_ts_actions_get (void **fortran_type_c, const int *ts_actions_in_shape_1, const int *ts_actions_in_len, const char *ts_actions_in)
void	exception_handling_ts_checkmessages_get (void **fortran_type_c, const int *ts_checkmessages_in_shape_1, const int *ts_checkmessages_in_len, const char *ts_checkmessages_in)
void	exception_handling_ts_message_get (void **fortran_type_c, const int *ts_message_in_len, const char *ts_message_in)
void	exception_handling_ts_trace_1_get (void **fortran_type_c, const int *ts_trace_1_in_len, const char *ts_trace_1_in)
void	exception_handling_ts_trace_2_get (void **fortran_type_c, const int *ts_trace_2_in_len, const char *ts_trace_2_in)
void	exception_handling_ts_trace_3_get (void **fortran_type_c, const int *ts_trace_3_in_len, const char *ts_trace_3_in)
template<class T >
void	fortran_resize (blitz::Array< T, 1 > &M, int sz1)
	If matrix is in Fortran order, resize it. More...
template<class T >
void	fortran_resize (blitz::Array< T, 2 > &M, int sz1, int sz2)
	If matrix is in Fortran order, resize it. More...
template<class T >
void	fortran_resize (blitz::Array< T, 3 > &M, int sz1, int sz2, int sz3)
	If matrix is in Fortran order, resize it. More...
void	full_gridding (double rearth, int nlower, int nupper, double changeheight, const blitz::Array< AutoDerivative< double >, 1 > &heights, const std::vector< boost::shared_ptr< AtmRefractiveIndex > > &refr_index, blitz::Array< AutoDerivative< double >, 2 > &fineweight, blitz::Array< AutoDerivative< double >, 2 > &fineradii, blitz::Array< AutoDerivative< double >, 3 > &finersqnsq, blitz::Array< int, 1 > &nquad)
	Output partial and whole layer fine gridding: nquad More...
blitz::Array< double, 2 >	generalized_inverse (const blitz::Array< double, 2 > &A, double Rcond=std::numeric_limits< double >::epsilon())
	This returns the generalized inverse of the given matrix. More...
blitz::Array< double, 2 >	generalized_inverse (const blitz::Array< double, 2 > &A, const blitz::Array< bool, 1 > &Zero_unused, double Rcond=std::numeric_limits< double >::epsilon())
	This returns the generalized inverse of the given matrix. More...
void	gsl_check_func (int status, const char *File, int Line)
	Check for gsl errors. More...
template<>
std::string	HdfFile::read_attribute< std::string > (const std::string &Aname) const
	Read the given attribute attached to a group or dataset. More...
template<>
std::vector< std::string >	HdfFile::read_attribute< std::vector< std::string > > (const std::string &Aname) const
	Read the given attribute attached to a group or dataset. More...
template<>
void	HdfFile::write_attribute< std::string > (const std::string &Aname, const std::string &Data)
	Write attribute to file. More...
template<>
void	HdfFile::write_attribute< std::vector< std::string > > (const std::string &Aname, const std::vector< std::string > &Data)
	Write attribute to file. More...
void	input_exception_handling_ts_inputactions_get (void **fortran_type_c, const int *ts_inputactions_in_shape_1, const int *ts_inputactions_in_len, const char *ts_inputactions_in)
void	input_exception_handling_ts_inputmessages_get (void **fortran_type_c, const int *ts_inputmessages_in_shape_1, const int *ts_inputmessages_in_len, const char *ts_inputmessages_in)
void	inputs_input_master_wrap (const int *filnam_in_len, const char *filnam_in, void **lidort_fixin_in, void **lidort_modin_in, void **lidort_inputstatus_in)
void	inputs_read_wrap (const char *filename, const int *filename_len, void **lidort_fixin_in, void **lidort_modin_in, void **lidort_inputstatus_in)
void	inputs_write_wrap (const char *filename, const int *filename_len, void **lidort_fixin_in, void **lidort_modin_in, void **lidort_inputstatus_in)
template<class T >
blitz::Array< T, 2 >	jacobian (const blitz::Array< AutoDerivative< T >, 1 > &Ad)
	Utility function to extract the Jacobian as a separate matrix from an array of AutoDerivative. More...
template<class T >
blitz::Array< T, 3 >	jacobian (const blitz::Array< AutoDerivative< T >, 2 > &Ad)
template<class T >
blitz::Array< T, 4 >	jacobian (const blitz::Array< AutoDerivative< T >, 3 > &Ad)
template<class T >
blitz::Array< T, 5 >	jacobian (const blitz::Array< AutoDerivative< T >, 4 > &Ad)
void	lcs_masters_lcs_master_wrap (void **lidort_fixin_in, void **lidort_modin_in, void **lidort_sup_in, void **lidort_out_in, void **lidort_linfixin_in, void **lidort_linmodin_in, void **lidort_linsup_in, void **lidort_linout_in)
void	lcs_masters_read_wrap (const char *filename, const int *filename_len, void **lidort_fixin_in, void **lidort_modin_in, void **lidort_sup_in, void **lidort_out_in, void **lidort_linfixin_in, void **lidort_linmodin_in, void **lidort_linsup_in, void **lidort_linout_in)
void	lcs_masters_write_wrap (const char *filename, const int *filename_len, void **lidort_fixin_in, void **lidort_modin_in, void **lidort_sup_in, void **lidort_out_in, void **lidort_linfixin_in, void **lidort_linmodin_in, void **lidort_linsup_in, void **lidort_linout_in)
void	lidort_exception_handling_c_alloc_init (struct lidort_exception_handling *transfer_struct_c, void **fortran_type_c)
void	lidort_exception_handling_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_exception_handling_c_destroy (void **fortran_type_c)
void	lidort_exception_handling_c_init_only (struct lidort_exception_handling *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_boolean_c_alloc_init (struct lidort_fixed_boolean *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_boolean_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_fixed_boolean_c_destroy (void **fortran_type_c)
void	lidort_fixed_boolean_c_init_only (struct lidort_fixed_boolean *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_chapman_c_alloc_init (struct lidort_fixed_chapman *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_chapman_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_fixed_chapman_c_destroy (void **fortran_type_c)
void	lidort_fixed_chapman_c_init_only (struct lidort_fixed_chapman *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_control_c_alloc_init (struct lidort_fixed_control *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_control_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_fixed_control_c_destroy (void **fortran_type_c)
void	lidort_fixed_control_c_init_only (struct lidort_fixed_control *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_inputs_c_alloc_init (struct lidort_fixed_inputs *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_inputs_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_fixed_inputs_c_destroy (void **fortran_type_c)
void	lidort_fixed_inputs_c_init_only (struct lidort_fixed_inputs *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_lincontrol_c_alloc_init (struct lidort_fixed_lincontrol *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_lincontrol_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_fixed_lincontrol_c_destroy (void **fortran_type_c)
void	lidort_fixed_lincontrol_c_init_only (struct lidort_fixed_lincontrol *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_lininputs_c_alloc_init (struct lidort_fixed_lininputs *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_lininputs_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_fixed_lininputs_c_destroy (void **fortran_type_c)
void	lidort_fixed_lininputs_c_init_only (struct lidort_fixed_lininputs *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_linoptical_c_alloc_init (struct lidort_fixed_linoptical *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_linoptical_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_fixed_linoptical_c_destroy (void **fortran_type_c)
void	lidort_fixed_linoptical_c_init_only (struct lidort_fixed_linoptical *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_optical_c_alloc_init (struct lidort_fixed_optical *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_optical_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_fixed_optical_c_destroy (void **fortran_type_c)
void	lidort_fixed_optical_c_init_only (struct lidort_fixed_optical *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_sunrays_c_alloc_init (struct lidort_fixed_sunrays *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_sunrays_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_fixed_sunrays_c_destroy (void **fortran_type_c)
void	lidort_fixed_sunrays_c_init_only (struct lidort_fixed_sunrays *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_uservalues_c_alloc_init (struct lidort_fixed_uservalues *transfer_struct_c, void **fortran_type_c)
void	lidort_fixed_uservalues_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_fixed_uservalues_c_destroy (void **fortran_type_c)
void	lidort_fixed_uservalues_c_init_only (struct lidort_fixed_uservalues *transfer_struct_c, void **fortran_type_c)
void	lidort_input_exception_handling_c_alloc_init (struct lidort_input_exception_handling *transfer_struct_c, void **fortran_type_c)
void	lidort_input_exception_handling_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_input_exception_handling_c_destroy (void **fortran_type_c)
void	lidort_input_exception_handling_c_init_only (struct lidort_input_exception_handling *transfer_struct_c, void **fortran_type_c)
void	lidort_linatmos_c_alloc_init (struct lidort_linatmos *transfer_struct_c, void **fortran_type_c)
void	lidort_linatmos_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_linatmos_c_destroy (void **fortran_type_c)
void	lidort_linatmos_c_init_only (struct lidort_linatmos *transfer_struct_c, void **fortran_type_c)
void	lidort_linoutputs_c_alloc_init (struct lidort_linoutputs *transfer_struct_c, void **fortran_type_c)
void	lidort_linoutputs_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_linoutputs_c_destroy (void **fortran_type_c)
void	lidort_linoutputs_c_init_only (struct lidort_linoutputs *transfer_struct_c, void **fortran_type_c)
void	lidort_linsup_brdf_c_alloc_init (struct lidort_linsup_brdf *transfer_struct_c, void **fortran_type_c)
void	lidort_linsup_brdf_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_linsup_brdf_c_destroy (void **fortran_type_c)
void	lidort_linsup_brdf_c_init_only (struct lidort_linsup_brdf *transfer_struct_c, void **fortran_type_c)
void	lidort_linsup_inout_c_alloc_init (struct lidort_linsup_inout *transfer_struct_c, void **fortran_type_c)
void	lidort_linsup_inout_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_linsup_inout_c_destroy (void **fortran_type_c)
void	lidort_linsup_inout_c_init_only (struct lidort_linsup_inout *transfer_struct_c, void **fortran_type_c)
void	lidort_linsup_sleave_c_alloc_init (struct lidort_linsup_sleave *transfer_struct_c, void **fortran_type_c)
void	lidort_linsup_sleave_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_linsup_sleave_c_destroy (void **fortran_type_c)
void	lidort_linsup_sleave_c_init_only (struct lidort_linsup_sleave *transfer_struct_c, void **fortran_type_c)
void	lidort_linsup_ss_atmos_c_alloc_init (struct lidort_linsup_ss_atmos *transfer_struct_c, void **fortran_type_c)
void	lidort_linsup_ss_atmos_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_linsup_ss_atmos_c_destroy (void **fortran_type_c)
void	lidort_linsup_ss_atmos_c_init_only (struct lidort_linsup_ss_atmos *transfer_struct_c, void **fortran_type_c)
void	lidort_linsup_ss_c_alloc_init (struct lidort_linsup_ss *transfer_struct_c, void **fortran_type_c)
void	lidort_linsup_ss_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_linsup_ss_c_destroy (void **fortran_type_c)
void	lidort_linsup_ss_c_init_only (struct lidort_linsup_ss *transfer_struct_c, void **fortran_type_c)
void	lidort_linsup_ss_surf_c_alloc_init (struct lidort_linsup_ss_surf *transfer_struct_c, void **fortran_type_c)
void	lidort_linsup_ss_surf_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_linsup_ss_surf_c_destroy (void **fortran_type_c)
void	lidort_linsup_ss_surf_c_init_only (struct lidort_linsup_ss_surf *transfer_struct_c, void **fortran_type_c)
void	lidort_linsurf_c_alloc_init (struct lidort_linsurf *transfer_struct_c, void **fortran_type_c)
void	lidort_linsurf_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_linsurf_c_destroy (void **fortran_type_c)
void	lidort_linsurf_c_init_only (struct lidort_linsurf *transfer_struct_c, void **fortran_type_c)
void	lidort_main_outputs_c_alloc_init (struct lidort_main_outputs *transfer_struct_c, void **fortran_type_c)
void	lidort_main_outputs_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_main_outputs_c_destroy (void **fortran_type_c)
void	lidort_main_outputs_c_init_only (struct lidort_main_outputs *transfer_struct_c, void **fortran_type_c)
void	lidort_modified_boolean_c_alloc_init (struct lidort_modified_boolean *transfer_struct_c, void **fortran_type_c)
void	lidort_modified_boolean_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_modified_boolean_c_destroy (void **fortran_type_c)
void	lidort_modified_boolean_c_init_only (struct lidort_modified_boolean *transfer_struct_c, void **fortran_type_c)
void	lidort_modified_chapman_c_alloc_init (struct lidort_modified_chapman *transfer_struct_c, void **fortran_type_c)
void	lidort_modified_chapman_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_modified_chapman_c_destroy (void **fortran_type_c)
void	lidort_modified_chapman_c_init_only (struct lidort_modified_chapman *transfer_struct_c, void **fortran_type_c)
void	lidort_modified_control_c_alloc_init (struct lidort_modified_control *transfer_struct_c, void **fortran_type_c)
void	lidort_modified_control_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_modified_control_c_destroy (void **fortran_type_c)
void	lidort_modified_control_c_init_only (struct lidort_modified_control *transfer_struct_c, void **fortran_type_c)
void	lidort_modified_inputs_c_alloc_init (struct lidort_modified_inputs *transfer_struct_c, void **fortran_type_c)
void	lidort_modified_inputs_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_modified_inputs_c_destroy (void **fortran_type_c)
void	lidort_modified_inputs_c_init_only (struct lidort_modified_inputs *transfer_struct_c, void **fortran_type_c)
void	lidort_modified_lininputs_c_alloc_init (struct lidort_modified_lininputs *transfer_struct_c, void **fortran_type_c)
void	lidort_modified_lininputs_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_modified_lininputs_c_destroy (void **fortran_type_c)
void	lidort_modified_lininputs_c_init_only (struct lidort_modified_lininputs *transfer_struct_c, void **fortran_type_c)
void	lidort_modified_optical_c_alloc_init (struct lidort_modified_optical *transfer_struct_c, void **fortran_type_c)
void	lidort_modified_optical_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_modified_optical_c_destroy (void **fortran_type_c)
void	lidort_modified_optical_c_init_only (struct lidort_modified_optical *transfer_struct_c, void **fortran_type_c)
void	lidort_modified_sunrays_c_alloc_init (struct lidort_modified_sunrays *transfer_struct_c, void **fortran_type_c)
void	lidort_modified_sunrays_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_modified_sunrays_c_destroy (void **fortran_type_c)
void	lidort_modified_sunrays_c_init_only (struct lidort_modified_sunrays *transfer_struct_c, void **fortran_type_c)
void	lidort_modified_uservalues_c_alloc_init (struct lidort_modified_uservalues *transfer_struct_c, void **fortran_type_c)
void	lidort_modified_uservalues_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_modified_uservalues_c_destroy (void **fortran_type_c)
void	lidort_modified_uservalues_c_init_only (struct lidort_modified_uservalues *transfer_struct_c, void **fortran_type_c)
void	lidort_outputs_c_alloc_init (struct lidort_outputs *transfer_struct_c, void **fortran_type_c)
void	lidort_outputs_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_outputs_c_destroy (void **fortran_type_c)
void	lidort_outputs_c_init_only (struct lidort_outputs *transfer_struct_c, void **fortran_type_c)
void	lidort_sup_brdf_c_alloc_init (struct lidort_sup_brdf *transfer_struct_c, void **fortran_type_c)
void	lidort_sup_brdf_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_sup_brdf_c_destroy (void **fortran_type_c)
void	lidort_sup_brdf_c_init_only (struct lidort_sup_brdf *transfer_struct_c, void **fortran_type_c)
void	lidort_sup_inout_c_alloc_init (struct lidort_sup_inout *transfer_struct_c, void **fortran_type_c)
void	lidort_sup_inout_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_sup_inout_c_destroy (void **fortran_type_c)
void	lidort_sup_inout_c_init_only (struct lidort_sup_inout *transfer_struct_c, void **fortran_type_c)
void	lidort_sup_sleave_c_alloc_init (struct lidort_sup_sleave *transfer_struct_c, void **fortran_type_c)
void	lidort_sup_sleave_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_sup_sleave_c_destroy (void **fortran_type_c)
void	lidort_sup_sleave_c_init_only (struct lidort_sup_sleave *transfer_struct_c, void **fortran_type_c)
void	lidort_sup_ss_c_alloc_init (struct lidort_sup_ss *transfer_struct_c, void **fortran_type_c)
void	lidort_sup_ss_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	lidort_sup_ss_c_destroy (void **fortran_type_c)
void	lidort_sup_ss_c_init_only (struct lidort_sup_ss *transfer_struct_c, void **fortran_type_c)
void	lps_masters_lps_master_wrap (void **lidort_fixin_in, void **lidort_modin_in, void **lidort_sup_in, void **lidort_out_in, void **lidort_linfixin_in, void **lidort_linmodin_in, void **lidort_linsup_in, void **lidort_linout_in)
void	lps_masters_read_wrap (const char *filename, const int *filename_len, void **lidort_fixin_in, void **lidort_modin_in, void **lidort_sup_in, void **lidort_out_in, void **lidort_linfixin_in, void **lidort_linmodin_in, void **lidort_linsup_in, void **lidort_linout_in)
void	lps_masters_write_wrap (const char *filename, const int *filename_len, void **lidort_fixin_in, void **lidort_modin_in, void **lidort_sup_in, void **lidort_out_in, void **lidort_linfixin_in, void **lidort_linmodin_in, void **lidort_linsup_in, void **lidort_linout_in)
void	masters_master_wrap (void **lidort_fixin_in, void **lidort_modin_in, void **lidort_sup_in, void **lidort_out_in)
void	masters_read_wrap (const char *filename, const int *filename_len, void **lidort_fixin_in, void **lidort_modin_in, void **lidort_sup_in, void **lidort_out_in)
void	masters_write_wrap (const char *filename, const int *filename_len, void **lidort_fixin_in, void **lidort_modin_in, void **lidort_sup_in, void **lidort_out_in)
blitz::Array< double, 2 >	multifit_covar (const blitz::Array< double, 2 > &J, double Eps_rel=std::numeric_limits< double >::epsilon())
bool	multifit_test_delta (const blitz::Array< double, 1 > &dx, const blitz::Array< double, 1 > &x, double Eps_abs=std::numeric_limits< double >::epsilon(), double Eps_rel=std::numeric_limits< double >::epsilon())
bool	multifit_test_gradient (const blitz::Array< double, 1 > &g, double Eps_abs=std::numeric_limits< double >::epsilon())
void	no_gsl_abort ()
	Turn off gsl errors abort. More...
double	operator- (const Time &T1, const Time &T2)
	Subtract two Times, giving the interval between them in seconds. More...
Unit	operator/ (double Scale_factor, const Unit &Unit)
bool	operator< (const FullPhysics::DoubleWithUnit &A, const FullPhysics::DoubleWithUnit &B)
bool	operator< (const Time &T1, const Time &T2)
	Compare Times. More...
bool	operator== (const FullPhysics::DoubleWithUnit &A, const FullPhysics::DoubleWithUnit &B)
	We define != in terms of this operator. More...
bool	operator== (const Time &T1, const Time &T2)
	We define != in terms of this operator. More...
std::istream &	operator>> (std::istream &Is, FitStatistic &Fstat)
std::istream &	operator>> (std::istream &Is, ConnorSolver &Solve)
double	planck (double wn, double temperature)
	Computes the black body function value using the planck function for a given wavenumber (cm^-1) and temperature (K). More...
AutoDerivative< double >	planck (double wn, double temperature, blitz::Array< double, 1 > &gradient)
Unit	pow (const Unit &Dunit, const boost::rational< int > &Exponent)
template<class T >
void	range_check_template (const T &Val, const T &Min, const T &Max, const char *File, int Line)
	Range check. More...
template<class T >
void	range_max_check_template (const T &Val, const T &Max, const char *File, int Line)
	Range check. More...
template<class T >
void	range_min_check_template (const T &Val, const T &Min, const char *File, int Line)
	Range check. More...
AutoDerivative< double >	refr_index_rs (double bwpar, const AutoDerivative< double > &press, const AutoDerivative< double > &temp)
AutoDerivative< double >	refr_index_vn (double wl, const AutoDerivative< double > &p, const AutoDerivative< double > &T, const AutoDerivative< double > &xc, const AutoDerivative< double > &xw)
void	refractive_bending (int start_lay, double theta, double dtr, const blitz::Array< AutoDerivative< double >, 1 > &rtimesn, const blitz::Array< int, 1 > &nquad, const blitz::Array< AutoDerivative< double >, 2 > &fineweight, const blitz::Array< AutoDerivative< double >, 2 > &fineradii, const blitz::Array< AutoDerivative< double >, 2 > &finersqnsq, blitz::Array< AutoDerivative< double >, 1 > &distances, AutoDerivative< double > &alpha, AutoDerivative< double > &anglefunc)
void	refractive_geometry (double rearth, const blitz::Array< AutoDerivative< double >, 1 > &heights, const std::vector< boost::shared_ptr< AtmRefractiveIndex > > &refr_index, const blitz::Array< double, 1 > &sza_values, blitz::Array< AutoDerivative< double >, 2 > &chapmanfactors, blitz::Array< AutoDerivative< double >, 1 > &toa_nadir_szangles, blitz::Array< AutoDerivative< double >, 1 > &toa_entry_szangles)
void	rf_gauleg (AutoDerivative< double > X1, AutoDerivative< double > X2, blitz::Array< AutoDerivative< double >, 1 > &X, blitz::Array< AutoDerivative< double >, 1 > &W, int KNUM)
void	set_lidort_pars (struct Lidort_Pars *lidort_pars_struct_c)
void	sleave_sup_inputs_c_alloc_init (struct sleave_sup_inputs *transfer_struct_c, void **fortran_type_c)
void	sleave_sup_inputs_c_copy (void **fortran_type_c_from, void **fortran_type_c_to)
void	sleave_sup_inputs_c_destroy (void **fortran_type_c)
void	sleave_sup_inputs_c_init_only (struct sleave_sup_inputs *transfer_struct_c, void **fortran_type_c)
blitz::Array< double, 1 >	solve_least_squares (const blitz::Array< double, 2 > &A, const blitz::Array< double, 1 > &B, double Rcond=1e-12)
	This solves the least squares system A*x = b, returning the minimum norm solution. More...
blitz::Array< double, 1 >	solve_least_squares_qr (const blitz::Array< double, 2 > &A, const blitz::Array< double, 1 > &B)
	This finds the least squares solution to the overdetermined system A x = b where the matrix A has more rows than columns. More...
double	sqr (double x)
void	straightline_geometry (bool do_plane_parallel, double rearth, const blitz::Array< AutoDerivative< double >, 1 > &heights, const blitz::Array< double, 1 > &sza_values, blitz::Array< AutoDerivative< double >, 2 > &chapmanfactors, blitz::Array< AutoDerivative< double >, 1 > &toa_nadir_szangles, blitz::Array< AutoDerivative< double >, 1 > &toa_entry_szangles)
	Free functions translated from Fortran. More...
void	sup_accessories_brdf_input_checker_wrap (void **brdf_sup_in_in, void **lidort_fixin_in, void **lidort_modin_in, void **lidort_brdfcheck_status_in)
void	sup_accessories_brdf_sleave_input_checker_wrap (void **sleave_sup_in_in, void **brdf_sup_in_in, void **brdf_sleavecheck_status_in)
void	sup_accessories_read_wrap (const char *filename, const int *filename_len, void **sleave_sup_in_in, void **brdf_sup_in_in, void **brdf_sleavecheck_status_in, void **lidort_fixin_in, void **lidort_modin_in, void **lidort_brdfcheck_status_in)
void	sup_accessories_write_wrap (const char *filename, const int *filename_len, void **sleave_sup_in_in, void **brdf_sup_in_in, void **brdf_sleavecheck_status_in, void **lidort_fixin_in, void **lidort_modin_in, void **lidort_brdfcheck_status_in)
void	svd (const blitz::Array< double, 2 > &A, blitz::Array< double, 1 > &S, blitz::Array< double, 2 > &U, blitz::Array< double, 2 > &VT)
	Compute the SVD decomposition of a matrix A = U * SIGMA * V^T. More...
template<typename T >
PyObject *	swig_to_python (const boost::shared_ptr< T > &V)
	Function to map from a shared point to a python object. More...
template<typename T >
PyObject *	swig_to_python (const boost::shared_ptr< T > *V)
PyObject *	swig_to_python_or_none (const boost::shared_ptr< GenericObject > &V)
template<class T , int D>
blitz::Array< T, D >	to_c_order (const blitz::Array< T, D > &In)
	Ensure that a given blitz::Array is contiguous, not reversed, and in C RowMajorArray format. More...
template<class T , int D>
blitz::Array< T, D >	to_c_order_const (const blitz::Array< T, D > &In)
	Ensure that a given blitz::Array is contiguous, not reversed, and in C RowMajorArray format. More...
template<class T , int D>
blitz::Array< T, D >	to_fortran (const blitz::Array< T, D > &In)
	Ensure that a given blitz::Array is contiguous, not reversed, and in fortran ColumnMajorArray format. More...
template<class T , int D>
blitz::Array< T, D >	to_fortran_const (const blitz::Array< T, D > &In)
	Ensure that a given blitz::Array is contiguous, not reversed, and in fortran ColumnMajorArray format. More...
template<class T >
boost::shared_ptr< T >	to_ptr (T &t)
	Helper routine to get a shared_ptr from a reference. More...
void	twostream_lps_master_m_twostream_lps_master_wrap (const int *maxlayers_in, const int *maxtotal_in, const int *maxmessages_in, const int *maxbeams_in, const int *max_geometries_in, const int *max_user_streams_in, const int *max_user_relazms_in, const int *max_user_obsgeoms_in, const int *max_atmoswfs_in, const int *max_surfacewfs_in, const int *max_sleavewfs_in, const bool *do_upwelling_in, const bool *do_dnwelling_in, const bool *do_plane_parallel_in, const bool *do_2s_levelout_in, const bool *do_mvout_only_in, const bool *do_additional_mvout_in, const bool *do_solar_sources_in, const bool *do_thermal_emission_in, const bool *do_surface_emission_in, const bool *do_d2s_scaling_in, const bool *do_brdf_surface_in, const bool *do_user_obsgeoms_in, const bool *do_surface_leaving_in, const bool *do_sl_isotropic_in, const bool *do_pentadiag_inverse_in, const int *bvpindex_in, const double *bvpscalefactor_in, const int *taylor_order_in, const double *taylor_small_in, const double *tcutoff_in, const int *nlayers_in, const int *ntotal_in, const double *stream_value_in, const int *n_user_obsgeoms_in, const double *user_obsgeoms_in, const int *n_user_streams_in, const double *user_angles_in, const int *n_user_relazms_in, const double *user_relazms_in, const double *flux_factor_in, const int *nbeams_in, const double *beam_szas_in, const double *earth_radius_in, const double *height_grid_in, const double *deltau_input_in, const double *omega_input_in, const double *asymm_input_in, const double *d2s_scaling_in, const double *thermal_bb_input_in, const double *lambertian_albedo_in, const double *brdf_f_0_in, const double *brdf_f_in, const double *ubrdf_f_in, const double *emissivity_in, const double *surfbb_in, const double *slterm_isotropic_in, const double *slterm_f_0_in, const bool *do_profile_wfs_in, const bool *do_surface_wfs_in, const bool *do_sleave_wfs_in, const bool *layer_vary_flag_in, const int *layer_vary_number_in, const int *n_surface_wfs_in, const int *n_sleave_wfs_in, const double *lssl_slterm_isotropic_in, const double *lssl_slterm_f_0_in, const double *l_deltau_input_in, const double *l_omega_input_in, const double *l_asymm_input_in, const double *l_d2s_scaling_in, const double *ls_brdf_f_0_in, const double *ls_brdf_f_in, const double *ls_ubrdf_f_in, const double *ls_emissivity_in, const double *intensity_toa_in, const double *profilewf_toa_in, const double *surfacewf_toa_in, const double *intensity_boa_in, const double *profilewf_boa_in, const double *surfacewf_boa_in, const double *radlevel_up_in, const double *radlevel_dn_in, const int *n_geometries_in, const double *profjaclevel_up_in, const double *profjaclevel_dn_in, const double *surfjaclevel_up_in, const double *surfjaclevel_dn_in, const double *fluxes_toa_in, const double *profjacfluxes_toa_in, const double *surfjacfluxes_toa_in, const double *fluxes_boa_in, const double *profjacfluxes_boa_in, const double *surfjacfluxes_boa_in, const int *status_inputcheck_in, const int *c_nmessages_in, const int *c_messages_shape_1, const int *c_messages_len, const char *c_messages_in, const int *c_actions_shape_1, const int *c_actions_len, const char *c_actions_in, const int *status_execution_in, const int *e_message_len, const char *e_message_in, const int *e_trace_1_len, const char *e_trace_1_in, const int *e_trace_2_len, const char *e_trace_2_in)
void	twostream_ls_brdf_supplement_m_twostream_ls_brdfmaster_wrap (const int *maxbeams_in, const int *max_user_streams_in, const int *max_user_obsgeoms_in, const int *maxstreams_brdf_in, const int *max_brdf_kernels_in, const int *max_brdf_parameters_in, const int *max_surfacewfs_in, const bool *do_solar_sources_in, const bool *do_user_obsgeoms_in, const bool *lambertian_kernel_flag_in, const bool *do_shadow_effect_in, const bool *do_surface_emission_in, const int *nbeams_in, const int *n_user_streams_in, const int *n_user_obsgeoms_in, const double *beam_szas_in, const double *user_angles_in, const double *user_obsgeoms_in, const double *stream_value_in, const int *nstreams_brdf_in, const int *n_brdf_kernels_in, const int *which_brdf_in, const double *brdf_factors_in, const int *n_brdf_parameters_in, const double *brdf_parameters_in, const bool *do_kernel_factor_wfs_in, const bool *do_kernel_params_wfs_in, const bool *do_kparams_derivs_in, const int *n_surface_wfs_in, const int *n_kernel_factor_wfs_in, const int *n_kernel_params_wfs_in, const double *brdf_f_0_in, const double *brdf_f_in, const double *ubrdf_f_in, const double *emissivity_in, const double *ls_brdf_f_0_in, const double *ls_brdf_f_in, const double *ls_ubrdf_f_in, const double *ls_emissivity_in, const int *status_brdfsup_in, const int *message_len, const char *message_in, const int *action_len, const char *action_in)

Variables
std::map< type_index, boost::shared_ptr< SwigTypeMapperBase > >	swig_type_map
	Map to go from type_index to the SwigTypeMapperBase object associated with it. More...

Detailed Description

Contains classes to abstract away details in various Spurr Radiative Transfer software.

Typedef Documentation

IlsTableLinear

typedef IlsTable<LinearInterpolate<AutoDerivative<double>, AutoDerivative<double> > > FullPhysics::IlsTableLinear

Definition at line 113 of file ils_table.h.

IlsTableLog

typedef IlsTable<LinearLogInterpolate<AutoDerivative<double>, AutoDerivative<double> > > FullPhysics::IlsTableLog

Definition at line 114 of file ils_table.h.

Enumeration Type Documentation

SpurrBrdfType

enum FullPhysics::SpurrBrdfType

These match numbers used internal to the Fortran code for Spurr based RTs.

Enumerator
LAMBERTIAN
ROSSTHIN
ROSSTHICK
LISPARSE
LIDENSE
HAPKE
ROUJEAN
RAHMAN
COXMUNK
BPDFSOIL
BPDFVEGN
BRDFNDVI
NEWCMGLINT

Definition at line 7 of file spurr_brdf_types.h.

Function Documentation

auto_derivative() [1/4]

blitz::Array<AutoDerivative<double>, 1> FullPhysics::auto_derivative ( const blitz::Array< double, 1 > &  Val, const blitz::Array< double, 2 > &  Jac  )

inline

Utility routine to take value and Jacobian separately and create a blitz::Array<AutoDerivative<double>, 1>

Definition at line 577 of file auto_derivative.h.

auto_derivative() [2/4]

blitz::Array<AutoDerivative<double>, 1> FullPhysics::auto_derivative ( const blitz::Array< double, 1 > &  Val, int  i_th, int  nvars  )

inline

Definition at line 589 of file auto_derivative.h.

auto_derivative() [3/4]

blitz::Array<AutoDerivative<double>, 2> FullPhysics::auto_derivative ( const blitz::Array< double, 2 > &  Val, const blitz::Array< double, 3 > &  Jac  )

inline

Definition at line 598 of file auto_derivative.h.

auto_derivative() [4/4]

blitz::Array<AutoDerivative<double>, 3> FullPhysics::auto_derivative ( const blitz::Array< double, 3 > &  Val, const blitz::Array< double, 4 > &  Jac  )

inline

Definition at line 611 of file auto_derivative.h.

brdf_input_exception_handling_bs_inputactions_get()

void FullPhysics::brdf_input_exception_handling_bs_inputactions_get	(	void **	fortran_type_c,
		const int *	bs_inputactions_in_shape_1,
		const int *	bs_inputactions_in_len,
		const char *	bs_inputactions_in
	)

brdf_input_exception_handling_bs_inputmessages_get()

void FullPhysics::brdf_input_exception_handling_bs_inputmessages_get	(	void **	fortran_type_c,
		const int *	bs_inputmessages_in_shape_1,
		const int *	bs_inputmessages_in_len,
		const char *	bs_inputmessages_in
	)

brdf_input_exception_handling_c_alloc_init()

void FullPhysics::brdf_input_exception_handling_c_alloc_init	(	struct brdf_input_exception_handling *	transfer_struct_c,
		void **	fortran_type_c
	)

brdf_input_exception_handling_c_copy()

void FullPhysics::brdf_input_exception_handling_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

brdf_input_exception_handling_c_destroy()

void FullPhysics::brdf_input_exception_handling_c_destroy

(

void **

fortran_type_c

)

brdf_input_exception_handling_c_init_only()

void FullPhysics::brdf_input_exception_handling_c_init_only	(	struct brdf_input_exception_handling *	transfer_struct_c,
		void **	fortran_type_c
	)

brdf_linsup_inputs_c_alloc_init()

void FullPhysics::brdf_linsup_inputs_c_alloc_init	(	struct brdf_linsup_inputs *	transfer_struct_c,
		void **	fortran_type_c
	)

brdf_linsup_inputs_c_copy()

void FullPhysics::brdf_linsup_inputs_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

brdf_linsup_inputs_c_destroy()

void FullPhysics::brdf_linsup_inputs_c_destroy

(

void **

fortran_type_c

)

brdf_linsup_inputs_c_init_only()

void FullPhysics::brdf_linsup_inputs_c_init_only	(	struct brdf_linsup_inputs *	transfer_struct_c,
		void **	fortran_type_c
	)

brdf_linsup_masters_m_brdf_lin_inputmaster_wrap()

void FullPhysics::brdf_linsup_masters_m_brdf_lin_inputmaster_wrap	(	const int *	filnam_in_len,
		const char *	filnam_in,
		void **	brdf_sup_in_in,
		void **	brdf_linsup_in_in,
		void **	brdf_sup_inputstatus_in
	)

brdf_linsup_masters_m_brdf_lin_mainmaster_wrap()

void FullPhysics::brdf_linsup_masters_m_brdf_lin_mainmaster_wrap	(	const bool *	do_debug_restoration_in,
		const int *	nmoments_input_in,
		void **	brdf_sup_in_in,
		void **	brdf_linsup_in_in,
		void **	brdf_sup_out_in,
		void **	brdf_linsup_out_in,
		void **	brdf_sup_outputstatus_in
	)

brdf_linsup_masters_m_read_wrap()

void FullPhysics::brdf_linsup_masters_m_read_wrap	(	const char *	filename,
		const int *	filename_len,
		void **	brdf_sup_in_in,
		void **	brdf_linsup_in_in,
		void **	brdf_sup_inputstatus_in,
		void **	brdf_sup_out_in,
		void **	brdf_linsup_out_in,
		void **	brdf_sup_outputstatus_in
	)

brdf_linsup_masters_m_write_wrap()

void FullPhysics::brdf_linsup_masters_m_write_wrap	(	const char *	filename,
		const int *	filename_len,
		void **	brdf_sup_in_in,
		void **	brdf_linsup_in_in,
		void **	brdf_sup_inputstatus_in,
		void **	brdf_sup_out_in,
		void **	brdf_linsup_out_in,
		void **	brdf_sup_outputstatus_in
	)

brdf_linsup_outputs_c_alloc_init()

void FullPhysics::brdf_linsup_outputs_c_alloc_init	(	struct brdf_linsup_outputs *	transfer_struct_c,
		void **	fortran_type_c
	)

brdf_linsup_outputs_c_copy()

void FullPhysics::brdf_linsup_outputs_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

brdf_linsup_outputs_c_destroy()

void FullPhysics::brdf_linsup_outputs_c_destroy

(

void **

fortran_type_c

)

brdf_linsup_outputs_c_init_only()

void FullPhysics::brdf_linsup_outputs_c_init_only	(	struct brdf_linsup_outputs *	transfer_struct_c,
		void **	fortran_type_c
	)

brdf_output_exception_handling_bs_outputmessages_get()

void FullPhysics::brdf_output_exception_handling_bs_outputmessages_get	(	void **	fortran_type_c,
		const int *	bs_outputmessages_in_shape_1,
		const int *	bs_outputmessages_in_len,
		const char *	bs_outputmessages_in
	)

brdf_output_exception_handling_c_alloc_init()

void FullPhysics::brdf_output_exception_handling_c_alloc_init	(	struct brdf_output_exception_handling *	transfer_struct_c,
		void **	fortran_type_c
	)

brdf_output_exception_handling_c_copy()

void FullPhysics::brdf_output_exception_handling_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

brdf_output_exception_handling_c_destroy()

void FullPhysics::brdf_output_exception_handling_c_destroy

(

void **

fortran_type_c

)

brdf_output_exception_handling_c_init_only()

void FullPhysics::brdf_output_exception_handling_c_init_only	(	struct brdf_output_exception_handling *	transfer_struct_c,
		void **	fortran_type_c
	)

brdf_sup_inputs_bs_brdf_names_get()

void FullPhysics::brdf_sup_inputs_bs_brdf_names_get	(	void **	fortran_type_c,
		const int *	bs_brdf_names_in_shape_1,
		const int *	bs_brdf_names_in_len,
		const char *	bs_brdf_names_in
	)

brdf_sup_inputs_c_alloc_init()

void FullPhysics::brdf_sup_inputs_c_alloc_init	(	struct brdf_sup_inputs *	transfer_struct_c,
		void **	fortran_type_c
	)

brdf_sup_inputs_c_copy()

void FullPhysics::brdf_sup_inputs_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

brdf_sup_inputs_c_destroy()

void FullPhysics::brdf_sup_inputs_c_destroy

(

void **

fortran_type_c

)

brdf_sup_inputs_c_init_only()

void FullPhysics::brdf_sup_inputs_c_init_only	(	struct brdf_sup_inputs *	transfer_struct_c,
		void **	fortran_type_c
	)

brdf_sup_masters_m_brdf_inputmaster_wrap()

void FullPhysics::brdf_sup_masters_m_brdf_inputmaster_wrap	(	const int *	filnam_in_len,
		const char *	filnam_in,
		void **	brdf_sup_in_in,
		void **	brdf_sup_inputstatus_in
	)

brdf_sup_masters_m_brdf_mainmaster_wrap()

void FullPhysics::brdf_sup_masters_m_brdf_mainmaster_wrap	(	const bool *	do_debug_restoration_in,
		const int *	nmoments_input_in,
		void **	brdf_sup_in_in,
		void **	brdf_sup_out_in,
		void **	brdf_sup_outputstatus_in
	)

brdf_sup_masters_m_read_wrap()

void FullPhysics::brdf_sup_masters_m_read_wrap	(	const char *	filename,
		const int *	filename_len,
		void **	brdf_sup_in_in,
		void **	brdf_sup_inputstatus_in,
		void **	brdf_sup_out_in,
		void **	brdf_sup_outputstatus_in
	)

brdf_sup_masters_m_write_wrap()

void FullPhysics::brdf_sup_masters_m_write_wrap	(	const char *	filename,
		const int *	filename_len,
		void **	brdf_sup_in_in,
		void **	brdf_sup_inputstatus_in,
		void **	brdf_sup_out_in,
		void **	brdf_sup_outputstatus_in
	)

brdf_sup_outputs_c_alloc_init()

void FullPhysics::brdf_sup_outputs_c_alloc_init	(	struct brdf_sup_outputs *	transfer_struct_c,
		void **	fortran_type_c
	)

brdf_sup_outputs_c_copy()

void FullPhysics::brdf_sup_outputs_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

brdf_sup_outputs_c_destroy()

void FullPhysics::brdf_sup_outputs_c_destroy

(

void **

fortran_type_c

)

brdf_sup_outputs_c_init_only()

void FullPhysics::brdf_sup_outputs_c_init_only	(	struct brdf_sup_outputs *	transfer_struct_c,
		void **	fortran_type_c
	)

calc_Dair()

AutoDerivative< double > FullPhysics::calc_Dair	(	const AutoDerivative< double > &	p,
		const AutoDerivative< double > &	tc
	)

Definition at line 261 of file refractive_index.cc.

calc_nw()

double FullPhysics::calc_nw

(

double

wlm2

)

Definition at line 273 of file refractive_index.cc.

calc_rho()

AutoDerivative< double > FullPhysics::calc_rho	(	const AutoDerivative< double > &	p,
		const AutoDerivative< double > &	x,
		const AutoDerivative< double > &	M,
		const AutoDerivative< double > &	Z,
		const AutoDerivative< double > &	T
	)

Definition at line 313 of file refractive_index.cc.

calc_Z()

AutoDerivative< double > FullPhysics::calc_Z	(	const AutoDerivative< double > &	p,
		const AutoDerivative< double > &	T,
		const AutoDerivative< double > &	tc,
		const AutoDerivative< double > &	xw
	)

Definition at line 290 of file refractive_index.cc.

closest_point() [1/2]

template<class T1 , class T2 >

int FullPhysics::closest_point	(	const blitz::Array< T1, 1 > &	target,
		T2	data
	)

Definition at line 13 of file closest_point.h.

closest_point() [2/2]

template<class T1 , class T2 >

blitz::Array<int, 1> FullPhysics::closest_point	(	const blitz::Array< T1, 1 > &	target,
		const blitz::Array< T2, 1 > &	data
	)

Definition at line 26 of file closest_point.h.

conversion()

double FullPhysics::conversion	(	const Unit &	Dunit_from,
		const Unit &	Dunit_to
	)

Return conversion factor to go from one unit to another.

This throws an exception of the units aren't commensurate.

Definition at line 180 of file unit.cc.

environment_substitute()

std::string FullPhysics::environment_substitute

(

const std::string &

In

)

This routine takes a string that may have one or more strings in it like .

It looks up the value of those variables in the environment variables, and then replaces them. So if for example we have "$(VAR1)/blah/$(VAR2)" with VAR1=foo and VAR2=bar, this returns "foo/blah/bar".

Definition at line 23 of file environment_substitute.cc.

exception_handling_ts_actions_get()

void FullPhysics::exception_handling_ts_actions_get	(	void **	fortran_type_c,
		const int *	ts_actions_in_shape_1,
		const int *	ts_actions_in_len,
		const char *	ts_actions_in
	)

exception_handling_ts_checkmessages_get()

void FullPhysics::exception_handling_ts_checkmessages_get	(	void **	fortran_type_c,
		const int *	ts_checkmessages_in_shape_1,
		const int *	ts_checkmessages_in_len,
		const char *	ts_checkmessages_in
	)

exception_handling_ts_message_get()

void FullPhysics::exception_handling_ts_message_get	(	void **	fortran_type_c,
		const int *	ts_message_in_len,
		const char *	ts_message_in
	)

exception_handling_ts_trace_1_get()

void FullPhysics::exception_handling_ts_trace_1_get	(	void **	fortran_type_c,
		const int *	ts_trace_1_in_len,
		const char *	ts_trace_1_in
	)

exception_handling_ts_trace_2_get()

void FullPhysics::exception_handling_ts_trace_2_get	(	void **	fortran_type_c,
		const int *	ts_trace_2_in_len,
		const char *	ts_trace_2_in
	)

exception_handling_ts_trace_3_get()

void FullPhysics::exception_handling_ts_trace_3_get	(	void **	fortran_type_c,
		const int *	ts_trace_3_in_len,
		const char *	ts_trace_3_in
	)

full_gridding()

void FullPhysics::full_gridding	(	double	rearth,
		int	nlower,
		int	nupper,
		double	changeheight,
		const blitz::Array< AutoDerivative< double >, 1 > &	heights,
		const std::vector< boost::shared_ptr< AtmRefractiveIndex > > &	refr_index,
		blitz::Array< AutoDerivative< double >, 2 > &	fineweight,
		blitz::Array< AutoDerivative< double >, 2 > &	fineradii,
		blitz::Array< AutoDerivative< double >, 3 > &	finersqnsq,
		blitz::Array< int, 1 > &	nquad
	)

Output

partial and whole layer fine gridding: nquad

Fine layering stuff: fineweight, fineradii, finersqnsq

Definition at line 314 of file chapman_boa.cc.

HdfFile::read_attribute< std::string >()

template<>

std::string FullPhysics::HdfFile::read_attribute< std::string > ( const std::string &  Aname ) const

inline

Read the given attribute attached to a group or dataset.

Definition at line 250 of file hdf_file.h.

HdfFile::read_attribute< std::vector< std::string > >()

template<>

std::vector<std::string> FullPhysics::HdfFile::read_attribute< std::vector< std::string > > ( const std::string &  Aname ) const

inline

Read the given attribute attached to a group or dataset.

Definition at line 278 of file hdf_file.h.

HdfFile::write_attribute< std::string >()

template<>

void FullPhysics::HdfFile::write_attribute< std::string > ( const std::string &  Aname, const std::string &  Data  )

inline

Write attribute to file.

Definition at line 745 of file hdf_file.h.

HdfFile::write_attribute< std::vector< std::string > >()

template<>

void FullPhysics::HdfFile::write_attribute< std::vector< std::string > > ( const std::string &  Aname, const std::vector< std::string > &  Data  )

inline

Write attribute to file.

Definition at line 770 of file hdf_file.h.

input_exception_handling_ts_inputactions_get()

void FullPhysics::input_exception_handling_ts_inputactions_get	(	void **	fortran_type_c,
		const int *	ts_inputactions_in_shape_1,
		const int *	ts_inputactions_in_len,
		const char *	ts_inputactions_in
	)

input_exception_handling_ts_inputmessages_get()

void FullPhysics::input_exception_handling_ts_inputmessages_get	(	void **	fortran_type_c,
		const int *	ts_inputmessages_in_shape_1,
		const int *	ts_inputmessages_in_len,
		const char *	ts_inputmessages_in
	)

inputs_input_master_wrap()

void FullPhysics::inputs_input_master_wrap	(	const int *	filnam_in_len,
		const char *	filnam_in,
		void **	lidort_fixin_in,
		void **	lidort_modin_in,
		void **	lidort_inputstatus_in
	)

inputs_read_wrap()

void FullPhysics::inputs_read_wrap	(	const char *	filename,
		const int *	filename_len,
		void **	lidort_fixin_in,
		void **	lidort_modin_in,
		void **	lidort_inputstatus_in
	)

inputs_write_wrap()

void FullPhysics::inputs_write_wrap	(	const char *	filename,
		const int *	filename_len,
		void **	lidort_fixin_in,
		void **	lidort_modin_in,
		void **	lidort_inputstatus_in
	)

jacobian() [1/4]

template<class T >

blitz::Array<T, 2> FullPhysics::jacobian ( const blitz::Array< AutoDerivative< T >, 1 > &  Ad )

inline

Utility function to extract the Jacobian as a separate matrix from an array of AutoDerivative.

Definition at line 485 of file auto_derivative.h.

jacobian() [2/4]

template<class T >

blitz::Array<T, 3> FullPhysics::jacobian ( const blitz::Array< AutoDerivative< T >, 2 > &  Ad )

inline

Definition at line 505 of file auto_derivative.h.

jacobian() [3/4]

template<class T >

blitz::Array<T, 4> FullPhysics::jacobian ( const blitz::Array< AutoDerivative< T >, 3 > &  Ad )

inline

Definition at line 526 of file auto_derivative.h.

jacobian() [4/4]

template<class T >

blitz::Array<T, 5> FullPhysics::jacobian ( const blitz::Array< AutoDerivative< T >, 4 > &  Ad )

inline

Definition at line 548 of file auto_derivative.h.

lcs_masters_lcs_master_wrap()

void FullPhysics::lcs_masters_lcs_master_wrap	(	void **	lidort_fixin_in,
		void **	lidort_modin_in,
		void **	lidort_sup_in,
		void **	lidort_out_in,
		void **	lidort_linfixin_in,
		void **	lidort_linmodin_in,
		void **	lidort_linsup_in,
		void **	lidort_linout_in
	)

lcs_masters_read_wrap()

void FullPhysics::lcs_masters_read_wrap	(	const char *	filename,
		const int *	filename_len,
		void **	lidort_fixin_in,
		void **	lidort_modin_in,
		void **	lidort_sup_in,
		void **	lidort_out_in,
		void **	lidort_linfixin_in,
		void **	lidort_linmodin_in,
		void **	lidort_linsup_in,
		void **	lidort_linout_in
	)

lcs_masters_write_wrap()

void FullPhysics::lcs_masters_write_wrap	(	const char *	filename,
		const int *	filename_len,
		void **	lidort_fixin_in,
		void **	lidort_modin_in,
		void **	lidort_sup_in,
		void **	lidort_out_in,
		void **	lidort_linfixin_in,
		void **	lidort_linmodin_in,
		void **	lidort_linsup_in,
		void **	lidort_linout_in
	)

lidort_exception_handling_c_alloc_init()

void FullPhysics::lidort_exception_handling_c_alloc_init	(	struct lidort_exception_handling *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_exception_handling_c_copy()

void FullPhysics::lidort_exception_handling_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_exception_handling_c_destroy()

void FullPhysics::lidort_exception_handling_c_destroy

(

void **

fortran_type_c

)

lidort_exception_handling_c_init_only()

void FullPhysics::lidort_exception_handling_c_init_only	(	struct lidort_exception_handling *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_boolean_c_alloc_init()

void FullPhysics::lidort_fixed_boolean_c_alloc_init	(	struct lidort_fixed_boolean *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_boolean_c_copy()

void FullPhysics::lidort_fixed_boolean_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_fixed_boolean_c_destroy()

void FullPhysics::lidort_fixed_boolean_c_destroy

(

void **

fortran_type_c

)

lidort_fixed_boolean_c_init_only()

void FullPhysics::lidort_fixed_boolean_c_init_only	(	struct lidort_fixed_boolean *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_chapman_c_alloc_init()

void FullPhysics::lidort_fixed_chapman_c_alloc_init	(	struct lidort_fixed_chapman *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_chapman_c_copy()

void FullPhysics::lidort_fixed_chapman_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_fixed_chapman_c_destroy()

void FullPhysics::lidort_fixed_chapman_c_destroy

(

void **

fortran_type_c

)

lidort_fixed_chapman_c_init_only()

void FullPhysics::lidort_fixed_chapman_c_init_only	(	struct lidort_fixed_chapman *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_control_c_alloc_init()

void FullPhysics::lidort_fixed_control_c_alloc_init	(	struct lidort_fixed_control *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_control_c_copy()

void FullPhysics::lidort_fixed_control_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_fixed_control_c_destroy()

void FullPhysics::lidort_fixed_control_c_destroy

(

void **

fortran_type_c

)

lidort_fixed_control_c_init_only()

void FullPhysics::lidort_fixed_control_c_init_only	(	struct lidort_fixed_control *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_inputs_c_alloc_init()

void FullPhysics::lidort_fixed_inputs_c_alloc_init	(	struct lidort_fixed_inputs *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_inputs_c_copy()

void FullPhysics::lidort_fixed_inputs_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_fixed_inputs_c_destroy()

void FullPhysics::lidort_fixed_inputs_c_destroy

(

void **

fortran_type_c

)

lidort_fixed_inputs_c_init_only()

void FullPhysics::lidort_fixed_inputs_c_init_only	(	struct lidort_fixed_inputs *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_lincontrol_c_alloc_init()

void FullPhysics::lidort_fixed_lincontrol_c_alloc_init	(	struct lidort_fixed_lincontrol *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_lincontrol_c_copy()

void FullPhysics::lidort_fixed_lincontrol_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_fixed_lincontrol_c_destroy()

void FullPhysics::lidort_fixed_lincontrol_c_destroy

(

void **

fortran_type_c

)

lidort_fixed_lincontrol_c_init_only()

void FullPhysics::lidort_fixed_lincontrol_c_init_only	(	struct lidort_fixed_lincontrol *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_lininputs_c_alloc_init()

void FullPhysics::lidort_fixed_lininputs_c_alloc_init	(	struct lidort_fixed_lininputs *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_lininputs_c_copy()

void FullPhysics::lidort_fixed_lininputs_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_fixed_lininputs_c_destroy()

void FullPhysics::lidort_fixed_lininputs_c_destroy

(

void **

fortran_type_c

)

lidort_fixed_lininputs_c_init_only()

void FullPhysics::lidort_fixed_lininputs_c_init_only	(	struct lidort_fixed_lininputs *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_linoptical_c_alloc_init()

void FullPhysics::lidort_fixed_linoptical_c_alloc_init	(	struct lidort_fixed_linoptical *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_linoptical_c_copy()

void FullPhysics::lidort_fixed_linoptical_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_fixed_linoptical_c_destroy()

void FullPhysics::lidort_fixed_linoptical_c_destroy

(

void **

fortran_type_c

)

lidort_fixed_linoptical_c_init_only()

void FullPhysics::lidort_fixed_linoptical_c_init_only	(	struct lidort_fixed_linoptical *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_optical_c_alloc_init()

void FullPhysics::lidort_fixed_optical_c_alloc_init	(	struct lidort_fixed_optical *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_optical_c_copy()

void FullPhysics::lidort_fixed_optical_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_fixed_optical_c_destroy()

void FullPhysics::lidort_fixed_optical_c_destroy

(

void **

fortran_type_c

)

lidort_fixed_optical_c_init_only()

void FullPhysics::lidort_fixed_optical_c_init_only	(	struct lidort_fixed_optical *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_sunrays_c_alloc_init()

void FullPhysics::lidort_fixed_sunrays_c_alloc_init	(	struct lidort_fixed_sunrays *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_sunrays_c_copy()

void FullPhysics::lidort_fixed_sunrays_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_fixed_sunrays_c_destroy()

void FullPhysics::lidort_fixed_sunrays_c_destroy

(

void **

fortran_type_c

)

lidort_fixed_sunrays_c_init_only()

void FullPhysics::lidort_fixed_sunrays_c_init_only	(	struct lidort_fixed_sunrays *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_uservalues_c_alloc_init()

void FullPhysics::lidort_fixed_uservalues_c_alloc_init	(	struct lidort_fixed_uservalues *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_fixed_uservalues_c_copy()

void FullPhysics::lidort_fixed_uservalues_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_fixed_uservalues_c_destroy()

void FullPhysics::lidort_fixed_uservalues_c_destroy

(

void **

fortran_type_c

)

lidort_fixed_uservalues_c_init_only()

void FullPhysics::lidort_fixed_uservalues_c_init_only	(	struct lidort_fixed_uservalues *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_input_exception_handling_c_alloc_init()

void FullPhysics::lidort_input_exception_handling_c_alloc_init	(	struct lidort_input_exception_handling *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_input_exception_handling_c_copy()

void FullPhysics::lidort_input_exception_handling_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_input_exception_handling_c_destroy()

void FullPhysics::lidort_input_exception_handling_c_destroy

(

void **

fortran_type_c

)

lidort_input_exception_handling_c_init_only()

void FullPhysics::lidort_input_exception_handling_c_init_only	(	struct lidort_input_exception_handling *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linatmos_c_alloc_init()

void FullPhysics::lidort_linatmos_c_alloc_init	(	struct lidort_linatmos *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linatmos_c_copy()

void FullPhysics::lidort_linatmos_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_linatmos_c_destroy()

void FullPhysics::lidort_linatmos_c_destroy

(

void **

fortran_type_c

)

lidort_linatmos_c_init_only()

void FullPhysics::lidort_linatmos_c_init_only	(	struct lidort_linatmos *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linoutputs_c_alloc_init()

void FullPhysics::lidort_linoutputs_c_alloc_init	(	struct lidort_linoutputs *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linoutputs_c_copy()

void FullPhysics::lidort_linoutputs_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_linoutputs_c_destroy()

void FullPhysics::lidort_linoutputs_c_destroy

(

void **

fortran_type_c

)

lidort_linoutputs_c_init_only()

void FullPhysics::lidort_linoutputs_c_init_only	(	struct lidort_linoutputs *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linsup_brdf_c_alloc_init()

void FullPhysics::lidort_linsup_brdf_c_alloc_init	(	struct lidort_linsup_brdf *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linsup_brdf_c_copy()

void FullPhysics::lidort_linsup_brdf_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_linsup_brdf_c_destroy()

void FullPhysics::lidort_linsup_brdf_c_destroy

(

void **

fortran_type_c

)

lidort_linsup_brdf_c_init_only()

void FullPhysics::lidort_linsup_brdf_c_init_only	(	struct lidort_linsup_brdf *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linsup_inout_c_alloc_init()

void FullPhysics::lidort_linsup_inout_c_alloc_init	(	struct lidort_linsup_inout *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linsup_inout_c_copy()

void FullPhysics::lidort_linsup_inout_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_linsup_inout_c_destroy()

void FullPhysics::lidort_linsup_inout_c_destroy

(

void **

fortran_type_c

)

lidort_linsup_inout_c_init_only()

void FullPhysics::lidort_linsup_inout_c_init_only	(	struct lidort_linsup_inout *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linsup_sleave_c_alloc_init()

void FullPhysics::lidort_linsup_sleave_c_alloc_init	(	struct lidort_linsup_sleave *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linsup_sleave_c_copy()

void FullPhysics::lidort_linsup_sleave_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_linsup_sleave_c_destroy()

void FullPhysics::lidort_linsup_sleave_c_destroy

(

void **

fortran_type_c

)

lidort_linsup_sleave_c_init_only()

void FullPhysics::lidort_linsup_sleave_c_init_only	(	struct lidort_linsup_sleave *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linsup_ss_atmos_c_alloc_init()

void FullPhysics::lidort_linsup_ss_atmos_c_alloc_init	(	struct lidort_linsup_ss_atmos *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linsup_ss_atmos_c_copy()

void FullPhysics::lidort_linsup_ss_atmos_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_linsup_ss_atmos_c_destroy()

void FullPhysics::lidort_linsup_ss_atmos_c_destroy

(

void **

fortran_type_c

)

lidort_linsup_ss_atmos_c_init_only()

void FullPhysics::lidort_linsup_ss_atmos_c_init_only	(	struct lidort_linsup_ss_atmos *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linsup_ss_c_alloc_init()

void FullPhysics::lidort_linsup_ss_c_alloc_init	(	struct lidort_linsup_ss *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linsup_ss_c_copy()

void FullPhysics::lidort_linsup_ss_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_linsup_ss_c_destroy()

void FullPhysics::lidort_linsup_ss_c_destroy

(

void **

fortran_type_c

)

lidort_linsup_ss_c_init_only()

void FullPhysics::lidort_linsup_ss_c_init_only	(	struct lidort_linsup_ss *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linsup_ss_surf_c_alloc_init()

void FullPhysics::lidort_linsup_ss_surf_c_alloc_init	(	struct lidort_linsup_ss_surf *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linsup_ss_surf_c_copy()

void FullPhysics::lidort_linsup_ss_surf_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_linsup_ss_surf_c_destroy()

void FullPhysics::lidort_linsup_ss_surf_c_destroy

(

void **

fortran_type_c

)

lidort_linsup_ss_surf_c_init_only()

void FullPhysics::lidort_linsup_ss_surf_c_init_only	(	struct lidort_linsup_ss_surf *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linsurf_c_alloc_init()

void FullPhysics::lidort_linsurf_c_alloc_init	(	struct lidort_linsurf *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_linsurf_c_copy()

void FullPhysics::lidort_linsurf_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_linsurf_c_destroy()

void FullPhysics::lidort_linsurf_c_destroy

(

void **

fortran_type_c

)

lidort_linsurf_c_init_only()

void FullPhysics::lidort_linsurf_c_init_only	(	struct lidort_linsurf *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_main_outputs_c_alloc_init()

void FullPhysics::lidort_main_outputs_c_alloc_init	(	struct lidort_main_outputs *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_main_outputs_c_copy()

void FullPhysics::lidort_main_outputs_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_main_outputs_c_destroy()

void FullPhysics::lidort_main_outputs_c_destroy

(

void **

fortran_type_c

)

lidort_main_outputs_c_init_only()

void FullPhysics::lidort_main_outputs_c_init_only	(	struct lidort_main_outputs *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_modified_boolean_c_alloc_init()

void FullPhysics::lidort_modified_boolean_c_alloc_init	(	struct lidort_modified_boolean *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_modified_boolean_c_copy()

void FullPhysics::lidort_modified_boolean_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_modified_boolean_c_destroy()

void FullPhysics::lidort_modified_boolean_c_destroy

(

void **

fortran_type_c

)

lidort_modified_boolean_c_init_only()

void FullPhysics::lidort_modified_boolean_c_init_only	(	struct lidort_modified_boolean *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_modified_chapman_c_alloc_init()

void FullPhysics::lidort_modified_chapman_c_alloc_init	(	struct lidort_modified_chapman *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_modified_chapman_c_copy()

void FullPhysics::lidort_modified_chapman_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_modified_chapman_c_destroy()

void FullPhysics::lidort_modified_chapman_c_destroy

(

void **

fortran_type_c

)

lidort_modified_chapman_c_init_only()

void FullPhysics::lidort_modified_chapman_c_init_only	(	struct lidort_modified_chapman *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_modified_control_c_alloc_init()

void FullPhysics::lidort_modified_control_c_alloc_init	(	struct lidort_modified_control *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_modified_control_c_copy()

void FullPhysics::lidort_modified_control_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_modified_control_c_destroy()

void FullPhysics::lidort_modified_control_c_destroy

(

void **

fortran_type_c

)

lidort_modified_control_c_init_only()

void FullPhysics::lidort_modified_control_c_init_only	(	struct lidort_modified_control *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_modified_inputs_c_alloc_init()

void FullPhysics::lidort_modified_inputs_c_alloc_init	(	struct lidort_modified_inputs *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_modified_inputs_c_copy()

void FullPhysics::lidort_modified_inputs_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_modified_inputs_c_destroy()

void FullPhysics::lidort_modified_inputs_c_destroy

(

void **

fortran_type_c

)

lidort_modified_inputs_c_init_only()

void FullPhysics::lidort_modified_inputs_c_init_only	(	struct lidort_modified_inputs *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_modified_lininputs_c_alloc_init()

void FullPhysics::lidort_modified_lininputs_c_alloc_init	(	struct lidort_modified_lininputs *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_modified_lininputs_c_copy()

void FullPhysics::lidort_modified_lininputs_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_modified_lininputs_c_destroy()

void FullPhysics::lidort_modified_lininputs_c_destroy

(

void **

fortran_type_c

)

lidort_modified_lininputs_c_init_only()

void FullPhysics::lidort_modified_lininputs_c_init_only	(	struct lidort_modified_lininputs *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_modified_optical_c_alloc_init()

void FullPhysics::lidort_modified_optical_c_alloc_init	(	struct lidort_modified_optical *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_modified_optical_c_copy()

void FullPhysics::lidort_modified_optical_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_modified_optical_c_destroy()

void FullPhysics::lidort_modified_optical_c_destroy

(

void **

fortran_type_c

)

lidort_modified_optical_c_init_only()

void FullPhysics::lidort_modified_optical_c_init_only	(	struct lidort_modified_optical *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_modified_sunrays_c_alloc_init()

void FullPhysics::lidort_modified_sunrays_c_alloc_init	(	struct lidort_modified_sunrays *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_modified_sunrays_c_copy()

void FullPhysics::lidort_modified_sunrays_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_modified_sunrays_c_destroy()

void FullPhysics::lidort_modified_sunrays_c_destroy

(

void **

fortran_type_c

)

lidort_modified_sunrays_c_init_only()

void FullPhysics::lidort_modified_sunrays_c_init_only	(	struct lidort_modified_sunrays *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_modified_uservalues_c_alloc_init()

void FullPhysics::lidort_modified_uservalues_c_alloc_init	(	struct lidort_modified_uservalues *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_modified_uservalues_c_copy()

void FullPhysics::lidort_modified_uservalues_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_modified_uservalues_c_destroy()

void FullPhysics::lidort_modified_uservalues_c_destroy

(

void **

fortran_type_c

)

lidort_modified_uservalues_c_init_only()

void FullPhysics::lidort_modified_uservalues_c_init_only	(	struct lidort_modified_uservalues *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_outputs_c_alloc_init()

void FullPhysics::lidort_outputs_c_alloc_init	(	struct lidort_outputs *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_outputs_c_copy()

void FullPhysics::lidort_outputs_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_outputs_c_destroy()

void FullPhysics::lidort_outputs_c_destroy

(

void **

fortran_type_c

)

lidort_outputs_c_init_only()

void FullPhysics::lidort_outputs_c_init_only	(	struct lidort_outputs *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_sup_brdf_c_alloc_init()

void FullPhysics::lidort_sup_brdf_c_alloc_init	(	struct lidort_sup_brdf *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_sup_brdf_c_copy()

void FullPhysics::lidort_sup_brdf_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_sup_brdf_c_destroy()

void FullPhysics::lidort_sup_brdf_c_destroy

(

void **

fortran_type_c

)

lidort_sup_brdf_c_init_only()

void FullPhysics::lidort_sup_brdf_c_init_only	(	struct lidort_sup_brdf *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_sup_inout_c_alloc_init()

void FullPhysics::lidort_sup_inout_c_alloc_init	(	struct lidort_sup_inout *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_sup_inout_c_copy()

void FullPhysics::lidort_sup_inout_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_sup_inout_c_destroy()

void FullPhysics::lidort_sup_inout_c_destroy

(

void **

fortran_type_c

)

lidort_sup_inout_c_init_only()

void FullPhysics::lidort_sup_inout_c_init_only	(	struct lidort_sup_inout *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_sup_sleave_c_alloc_init()

void FullPhysics::lidort_sup_sleave_c_alloc_init	(	struct lidort_sup_sleave *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_sup_sleave_c_copy()

void FullPhysics::lidort_sup_sleave_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_sup_sleave_c_destroy()

void FullPhysics::lidort_sup_sleave_c_destroy

(

void **

fortran_type_c

)

lidort_sup_sleave_c_init_only()

void FullPhysics::lidort_sup_sleave_c_init_only	(	struct lidort_sup_sleave *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_sup_ss_c_alloc_init()

void FullPhysics::lidort_sup_ss_c_alloc_init	(	struct lidort_sup_ss *	transfer_struct_c,
		void **	fortran_type_c
	)

lidort_sup_ss_c_copy()

void FullPhysics::lidort_sup_ss_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

lidort_sup_ss_c_destroy()

void FullPhysics::lidort_sup_ss_c_destroy

(

void **

fortran_type_c

)

lidort_sup_ss_c_init_only()

void FullPhysics::lidort_sup_ss_c_init_only	(	struct lidort_sup_ss *	transfer_struct_c,
		void **	fortran_type_c
	)

lps_masters_lps_master_wrap()

void FullPhysics::lps_masters_lps_master_wrap	(	void **	lidort_fixin_in,
		void **	lidort_modin_in,
		void **	lidort_sup_in,
		void **	lidort_out_in,
		void **	lidort_linfixin_in,
		void **	lidort_linmodin_in,
		void **	lidort_linsup_in,
		void **	lidort_linout_in
	)

lps_masters_read_wrap()

void FullPhysics::lps_masters_read_wrap	(	const char *	filename,
		const int *	filename_len,
		void **	lidort_fixin_in,
		void **	lidort_modin_in,
		void **	lidort_sup_in,
		void **	lidort_out_in,
		void **	lidort_linfixin_in,
		void **	lidort_linmodin_in,
		void **	lidort_linsup_in,
		void **	lidort_linout_in
	)

lps_masters_write_wrap()

void FullPhysics::lps_masters_write_wrap	(	const char *	filename,
		const int *	filename_len,
		void **	lidort_fixin_in,
		void **	lidort_modin_in,
		void **	lidort_sup_in,
		void **	lidort_out_in,
		void **	lidort_linfixin_in,
		void **	lidort_linmodin_in,
		void **	lidort_linsup_in,
		void **	lidort_linout_in
	)

masters_master_wrap()

void FullPhysics::masters_master_wrap	(	void **	lidort_fixin_in,
		void **	lidort_modin_in,
		void **	lidort_sup_in,
		void **	lidort_out_in
	)

masters_read_wrap()

void FullPhysics::masters_read_wrap	(	const char *	filename,
		const int *	filename_len,
		void **	lidort_fixin_in,
		void **	lidort_modin_in,
		void **	lidort_sup_in,
		void **	lidort_out_in
	)

masters_write_wrap()

void FullPhysics::masters_write_wrap	(	const char *	filename,
		const int *	filename_len,
		void **	lidort_fixin_in,
		void **	lidort_modin_in,
		void **	lidort_sup_in,
		void **	lidort_out_in
	)

operator-()

double FullPhysics::operator- ( const Time &  T1, const Time &  T2  )

inline

Subtract two Times, giving the interval between them in seconds.

Definition at line 118 of file fp_time.h.

operator/()

Unit FullPhysics::operator/ ( double  Scale_factor, const Unit &  Unit  )

inline

Definition at line 102 of file unit.h.

operator<() [1/2]

bool FullPhysics::operator< ( const FullPhysics::DoubleWithUnit &  A, const FullPhysics::DoubleWithUnit &  B  )

inline

We define <=, >= and > in terms of this operator.

Definition at line 75 of file double_with_unit.h.

operator<() [2/2]

bool FullPhysics::operator< ( const Time &  T1, const Time &  T2  )

inline

Compare Times.

We define <=, >= and > in terms of this operator.

Definition at line 128 of file fp_time.h.

operator==() [1/2]

bool FullPhysics::operator== ( const FullPhysics::DoubleWithUnit &  A, const FullPhysics::DoubleWithUnit &  B  )

inline

We define != in terms of this operator.

Definition at line 80 of file double_with_unit.h.

operator==() [2/2]

bool FullPhysics::operator== ( const Time &  T1, const Time &  T2  )

inline

We define != in terms of this operator.

Definition at line 134 of file fp_time.h.

operator>>() [1/2]

std::istream& FullPhysics::operator>> ( std::istream &  Is, FitStatistic &  Fstat  )

inline

Definition at line 172 of file convergence_check.h.

operator>>() [2/2]

std::istream& FullPhysics::operator>> ( std::istream &  Is, ConnorSolver &  Solve  )

inline

Definition at line 399 of file connor_solver.h.

planck() [1/2]

double FullPhysics::planck	(	double	wn,
		double	temperature
	)

Computes the black body function value using the planck function for a given wavenumber (cm^-1) and temperature (K).

Result value will be in W/m^2/sr/cm^-1

Does not compute the derivative.

Definition at line 16 of file planck.cc.

planck() [2/2]

AutoDerivative<double> FullPhysics::planck	(	double	wn,
		double	temperature,
		blitz::Array< double, 1 > &	gradient
	)

pow()

Unit FullPhysics::pow	(	const Unit &	Dunit,
		const boost::rational< int > &	Exponent
	)

Definition at line 158 of file unit.cc.

refr_index_rs()

AutoDerivative< double > FullPhysics::refr_index_rs	(	double	bwpar,
		const AutoDerivative< double > &	press,
		const AutoDerivative< double > &	temp
	)

Definition at line 91 of file refractive_index.cc.

refr_index_vn()

AutoDerivative< double > FullPhysics::refr_index_vn	(	double	wl,
		const AutoDerivative< double > &	p,
		const AutoDerivative< double > &	T,
		const AutoDerivative< double > &	xc,
		const AutoDerivative< double > &	xw
	)

Definition at line 114 of file refractive_index.cc.

refractive_bending()

void FullPhysics::refractive_bending	(	int	start_lay,
		double	theta,
		double	dtr,
		const blitz::Array< AutoDerivative< double >, 1 > &	rtimesn,
		const blitz::Array< int, 1 > &	nquad,
		const blitz::Array< AutoDerivative< double >, 2 > &	fineweight,
		const blitz::Array< AutoDerivative< double >, 2 > &	fineradii,
		const blitz::Array< AutoDerivative< double >, 2 > &	finersqnsq,
		blitz::Array< AutoDerivative< double >, 1 > &	distances,
		AutoDerivative< double > &	alpha,
		AutoDerivative< double > &	anglefunc
	)

Definition at line 250 of file chapman_boa.cc.

refractive_geometry()

void FullPhysics::refractive_geometry	(	double	rearth,
		const blitz::Array< AutoDerivative< double >, 1 > &	heights,
		const std::vector< boost::shared_ptr< AtmRefractiveIndex > > &	refr_index,
		const blitz::Array< double, 1 > &	sza_values,
		blitz::Array< AutoDerivative< double >, 2 > &	chapmanfactors,
		blitz::Array< AutoDerivative< double >, 1 > &	toa_nadir_szangles,
		blitz::Array< AutoDerivative< double >, 1 > &	toa_entry_szangles
	)

Definition at line 151 of file chapman_boa.cc.

rf_gauleg()

void FullPhysics::rf_gauleg	(	AutoDerivative< double >	X1,
		AutoDerivative< double >	X2,
		blitz::Array< AutoDerivative< double >, 1 > &	X,
		blitz::Array< AutoDerivative< double >, 1 > &	W,
		int	KNUM
	)

Definition at line 4 of file rf_gauleg.cc.

set_lidort_pars()

void FullPhysics::set_lidort_pars

(

struct Lidort_Pars *

lidort_pars_struct_c

)

sleave_sup_inputs_c_alloc_init()

void FullPhysics::sleave_sup_inputs_c_alloc_init	(	struct sleave_sup_inputs *	transfer_struct_c,
		void **	fortran_type_c
	)

sleave_sup_inputs_c_copy()

void FullPhysics::sleave_sup_inputs_c_copy	(	void **	fortran_type_c_from,
		void **	fortran_type_c_to
	)

sleave_sup_inputs_c_destroy()

void FullPhysics::sleave_sup_inputs_c_destroy

(

void **

fortran_type_c

)

sleave_sup_inputs_c_init_only()

void FullPhysics::sleave_sup_inputs_c_init_only	(	struct sleave_sup_inputs *	transfer_struct_c,
		void **	fortran_type_c
	)

straightline_geometry()

void FullPhysics::straightline_geometry	(	bool	do_plane_parallel,
		double	rearth,
		const blitz::Array< AutoDerivative< double >, 1 > &	heights,
		const blitz::Array< double, 1 > &	sza_values,
		blitz::Array< AutoDerivative< double >, 2 > &	chapmanfactors,
		blitz::Array< AutoDerivative< double >, 1 > &	toa_nadir_szangles,
		blitz::Array< AutoDerivative< double >, 1 > &	toa_entry_szangles
	)

Free functions translated from Fortran.

Definition at line 69 of file chapman_boa.cc.

sup_accessories_brdf_input_checker_wrap()

void FullPhysics::sup_accessories_brdf_input_checker_wrap	(	void **	brdf_sup_in_in,
		void **	lidort_fixin_in,
		void **	lidort_modin_in,
		void **	lidort_brdfcheck_status_in
	)

sup_accessories_brdf_sleave_input_checker_wrap()

void FullPhysics::sup_accessories_brdf_sleave_input_checker_wrap	(	void **	sleave_sup_in_in,
		void **	brdf_sup_in_in,
		void **	brdf_sleavecheck_status_in
	)

sup_accessories_read_wrap()

void FullPhysics::sup_accessories_read_wrap	(	const char *	filename,
		const int *	filename_len,
		void **	sleave_sup_in_in,
		void **	brdf_sup_in_in,
		void **	brdf_sleavecheck_status_in,
		void **	lidort_fixin_in,
		void **	lidort_modin_in,
		void **	lidort_brdfcheck_status_in
	)

sup_accessories_write_wrap()

void FullPhysics::sup_accessories_write_wrap	(	const char *	filename,
		const int *	filename_len,
		void **	sleave_sup_in_in,
		void **	brdf_sup_in_in,
		void **	brdf_sleavecheck_status_in,
		void **	lidort_fixin_in,
		void **	lidort_modin_in,
		void **	lidort_brdfcheck_status_in
	)

swig_to_python() [1/2]

template<typename T >

PyObject* FullPhysics::swig_to_python ( const boost::shared_ptr< T > &  V )

inline

Function to map from a shared point to a python object.

Definition at line 13 of file swig_to_python.h.

swig_to_python() [2/2]

template<typename T >

PyObject* FullPhysics::swig_to_python ( const boost::shared_ptr< T > *  V )

inline

Definition at line 114 of file swig_to_python.h.

swig_to_python_or_none()

PyObject* FullPhysics::swig_to_python_or_none ( const boost::shared_ptr< GenericObject > &  V )

inline

Definition at line 64 of file swig_to_python.h.

to_ptr()

template<class T >

boost::shared_ptr<T> FullPhysics::to_ptr

(

T &

t

)

Helper routine to get a shared_ptr from a reference.

The reference is not deleted when the shared_ptr is.

Definition at line 24 of file null_deleter.h.

twostream_lps_master_m_twostream_lps_master_wrap()

void FullPhysics::twostream_lps_master_m_twostream_lps_master_wrap	(	const int *	maxlayers_in,
		const int *	maxtotal_in,
		const int *	maxmessages_in,
		const int *	maxbeams_in,
		const int *	max_geometries_in,
		const int *	max_user_streams_in,
		const int *	max_user_relazms_in,
		const int *	max_user_obsgeoms_in,
		const int *	max_atmoswfs_in,
		const int *	max_surfacewfs_in,
		const int *	max_sleavewfs_in,
		const bool *	do_upwelling_in,
		const bool *	do_dnwelling_in,
		const bool *	do_plane_parallel_in,
		const bool *	do_2s_levelout_in,
		const bool *	do_mvout_only_in,
		const bool *	do_additional_mvout_in,
		const bool *	do_solar_sources_in,
		const bool *	do_thermal_emission_in,
		const bool *	do_surface_emission_in,
		const bool *	do_d2s_scaling_in,
		const bool *	do_brdf_surface_in,
		const bool *	do_user_obsgeoms_in,
		const bool *	do_surface_leaving_in,
		const bool *	do_sl_isotropic_in,
		const bool *	do_pentadiag_inverse_in,
		const int *	bvpindex_in,
		const double *	bvpscalefactor_in,
		const int *	taylor_order_in,
		const double *	taylor_small_in,
		const double *	tcutoff_in,
		const int *	nlayers_in,
		const int *	ntotal_in,
		const double *	stream_value_in,
		const int *	n_user_obsgeoms_in,
		const double *	user_obsgeoms_in,
		const int *	n_user_streams_in,
		const double *	user_angles_in,
		const int *	n_user_relazms_in,
		const double *	user_relazms_in,
		const double *	flux_factor_in,
		const int *	nbeams_in,
		const double *	beam_szas_in,
		const double *	earth_radius_in,
		const double *	height_grid_in,
		const double *	deltau_input_in,
		const double *	omega_input_in,
		const double *	asymm_input_in,
		const double *	d2s_scaling_in,
		const double *	thermal_bb_input_in,
		const double *	lambertian_albedo_in,
		const double *	brdf_f_0_in,
		const double *	brdf_f_in,
		const double *	ubrdf_f_in,
		const double *	emissivity_in,
		const double *	surfbb_in,
		const double *	slterm_isotropic_in,
		const double *	slterm_f_0_in,
		const bool *	do_profile_wfs_in,
		const bool *	do_surface_wfs_in,
		const bool *	do_sleave_wfs_in,
		const bool *	layer_vary_flag_in,
		const int *	layer_vary_number_in,
		const int *	n_surface_wfs_in,
		const int *	n_sleave_wfs_in,
		const double *	lssl_slterm_isotropic_in,
		const double *	lssl_slterm_f_0_in,
		const double *	l_deltau_input_in,
		const double *	l_omega_input_in,
		const double *	l_asymm_input_in,
		const double *	l_d2s_scaling_in,
		const double *	ls_brdf_f_0_in,
		const double *	ls_brdf_f_in,
		const double *	ls_ubrdf_f_in,
		const double *	ls_emissivity_in,
		const double *	intensity_toa_in,
		const double *	profilewf_toa_in,
		const double *	surfacewf_toa_in,
		const double *	intensity_boa_in,
		const double *	profilewf_boa_in,
		const double *	surfacewf_boa_in,
		const double *	radlevel_up_in,
		const double *	radlevel_dn_in,
		const int *	n_geometries_in,
		const double *	profjaclevel_up_in,
		const double *	profjaclevel_dn_in,
		const double *	surfjaclevel_up_in,
		const double *	surfjaclevel_dn_in,
		const double *	fluxes_toa_in,
		const double *	profjacfluxes_toa_in,
		const double *	surfjacfluxes_toa_in,
		const double *	fluxes_boa_in,
		const double *	profjacfluxes_boa_in,
		const double *	surfjacfluxes_boa_in,
		const int *	status_inputcheck_in,
		const int *	c_nmessages_in,
		const int *	c_messages_shape_1,
		const int *	c_messages_len,
		const char *	c_messages_in,
		const int *	c_actions_shape_1,
		const int *	c_actions_len,
		const char *	c_actions_in,
		const int *	status_execution_in,
		const int *	e_message_len,
		const char *	e_message_in,
		const int *	e_trace_1_len,
		const char *	e_trace_1_in,
		const int *	e_trace_2_len,
		const char *	e_trace_2_in
	)

twostream_ls_brdf_supplement_m_twostream_ls_brdfmaster_wrap()

void FullPhysics::twostream_ls_brdf_supplement_m_twostream_ls_brdfmaster_wrap	(	const int *	maxbeams_in,
		const int *	max_user_streams_in,
		const int *	max_user_obsgeoms_in,
		const int *	maxstreams_brdf_in,
		const int *	max_brdf_kernels_in,
		const int *	max_brdf_parameters_in,
		const int *	max_surfacewfs_in,
		const bool *	do_solar_sources_in,
		const bool *	do_user_obsgeoms_in,
		const bool *	lambertian_kernel_flag_in,
		const bool *	do_shadow_effect_in,
		const bool *	do_surface_emission_in,
		const int *	nbeams_in,
		const int *	n_user_streams_in,
		const int *	n_user_obsgeoms_in,
		const double *	beam_szas_in,
		const double *	user_angles_in,
		const double *	user_obsgeoms_in,
		const double *	stream_value_in,
		const int *	nstreams_brdf_in,
		const int *	n_brdf_kernels_in,
		const int *	which_brdf_in,
		const double *	brdf_factors_in,
		const int *	n_brdf_parameters_in,
		const double *	brdf_parameters_in,
		const bool *	do_kernel_factor_wfs_in,
		const bool *	do_kernel_params_wfs_in,
		const bool *	do_kparams_derivs_in,
		const int *	n_surface_wfs_in,
		const int *	n_kernel_factor_wfs_in,
		const int *	n_kernel_params_wfs_in,
		const double *	brdf_f_0_in,
		const double *	brdf_f_in,
		const double *	ubrdf_f_in,
		const double *	emissivity_in,
		const double *	ls_brdf_f_0_in,
		const double *	ls_brdf_f_in,
		const double *	ls_ubrdf_f_in,
		const double *	ls_emissivity_in,
		const int *	status_brdfsup_in,
		const int *	message_len,
		const char *	message_in,
		const int *	action_len,
		const char *	action_in
	)

Variable Documentation

swig_type_map

std::map<type_index, boost::shared_ptr<SwigTypeMapperBase> > FullPhysics::swig_type_map

Map to go from type_index to the SwigTypeMapperBase object associated with it.